Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MIR30E-201ENST00000362104 92 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PDGFBP01127 RNU6-769P-201ENST00000384407 104 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PDGFBP01127 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PDGFBP01127 AL021407.1-201ENST00000404531 386 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 RN7SKP266-201ENST00000410232 287 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 RNA5SP247-201ENST00000411181 105 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.88□□□□□ -1.95
PDGFBP01127 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFBP01127 RPS7P13-201ENST00000413955 498 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 ZNF863P-201ENST00000426746 417 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AL365184.2-201ENST00000431139 435 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 OR2B8P-201ENST00000432841 938 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 BX679664.1-201ENST00000434429 253 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.88□□□□□ -1.95
PDGFBP01127 AL512286.1-201ENST00000439244 400 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 MTND1P30-201ENST00000441241 901 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.88□□□□□ -1.95
PDGFBP01127 GDI2P2-201ENST00000445131 608 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AC125238.1-201ENST00000448842 249 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 LARP1BP2-201ENST00000486594 519 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AC022447.3-201ENST00000506865 495 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AC005178.1-201ENST00000508392 440 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 OR5BM1P-201ENST00000512021 366 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 NRON-201ENST00000517270 370 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.88□□□□□ -1.95
PDGFBP01127 AP002770.2-201ENST00000543613 532 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AC107016.2-201ENST00000547968 190 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFBP01127 AC135628.1-201ENST00000568867 534 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 MIR4307-201ENST00000582802 84 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AC105129.3-201ENST00000605455 485 ntBASIC2.88□□□□□ -1.95
PDGFBP01127 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.88□□□□□ -1.95
PDGFBP01127 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFBP01127 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.88□□□□□ -1.95
PDGFBP01127 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
PDGFBP01127 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
PDGFBP01127 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PDGFBP01127 RNA5SP99-201ENST00000364020 114 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 RNU6-501P-201ENST00000364072 100 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AL031577.2-201ENST00000404133 280 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 RPS4XP7-201ENST00000406274 780 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 MIR1305-201ENST00000408300 86 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 RN7SKP140-201ENST00000411196 284 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 RNA5SP107-201ENST00000411358 122 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 RPL7P10-201ENST00000417407 739 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AC009518.2-201ENST00000418056 731 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 Z98742.3-201ENST00000418637 326 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.87□□□□□ -1.95
PDGFBP01127 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.87□□□□□ -1.95
PDGFBP01127 AL591806.2-201ENST00000433122 173 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 RPL37P21-201ENST00000435890 276 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 RPL22P17-201ENST00000438729 315 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFBP01127 AC021205.2-201ENST00000480069 347 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AC138853.1-201ENST00000503549 823 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PDGFBP01127 SEM1P1-201ENST00000506694 209 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PDGFBP01127 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFBP01127 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFBP01127 RNU6-991P-201ENST00000516168 107 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AC025881.1-201ENST00000518851 512 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.87□□□□□ -1.95
PDGFBP01127 AP003122.3-201ENST00000526316 255 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AC005951.2-201ENST00000576282 495 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AC008088.1-201ENST00000580993 280 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 Z99497.2-201ENST00000603634 310 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 BCRP9-201ENST00000605312 388 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AL031775.1-201ENST00000607014 887 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AC092608.2-201ENST00000624427 218 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 AC093591.3-201ENST00000634516 308 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PDGFBP01127 AC026241.1-201ENST00000517873 2142 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PDGFBP01127 CCT4P2-201ENST00000233836 1548 ntBASIC2.87□□□□□ -1.95
PDGFBP01127 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.87□□□□□ -1.95
PDGFBP01127 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PDGFBP01127 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PDGFBP01127 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFBP01127 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFBP01127 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFBP01127 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PDGFBP01127 RNA5SP289-201ENST00000362332 137 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 RNU6-500P-201ENST00000362349 107 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 RNU5F-6P-201ENST00000362979 116 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AP002088.1-201ENST00000382740 395 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 RNU1-39P-201ENST00000383897 165 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 MIR9-1-201ENST00000385198 89 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 MT-TH-201ENST00000387441 69 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AL109755.1-201ENST00000401791 649 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AL049545.1-201ENST00000401856 572 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 RPL17P12-201ENST00000413391 526 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 UBE2FP1-201ENST00000416536 447 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AC245291.1-201ENST00000419501 328 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AL451054.2-201ENST00000420896 202 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms