Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL139109.1-201ENST00000455491 297 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM13O60858 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AC096745.1-201ENST00000509945 370 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 IGLV2-28-201ENST00000520681 304 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 RNU6-323P-201ENST00000521915 107 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AC007991.1-201ENST00000522680 631 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM13O60858 AP003733.2-201ENST00000529409 171 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.3□□□□□ -1.72
TRIM13O60858 AC026371.1-201ENST00000551867 419 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AL133153.1-201ENST00000557756 303 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AC091042.1-201ENST00000579213 173 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 MIR4737-201ENST00000583979 81 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AC006557.5-201ENST00000603126 811 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AL355812.1-201ENST00000603215 216 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AL731566.2-201ENST00000618971 317 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AC130454.1-201ENST00000622948 401 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM13O60858 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM13O60858 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM13O60858 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM13O60858 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM13O60858 MFSD8-242ENST00000641690 4199 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TRIM13O60858 SNORD50B-201ENST00000364995 70 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 RNU6-398P-201ENST00000384143 109 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 U3.29-201ENST00000391296 212 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 SNORD58.1-201ENST00000391313 66 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AC004552.1-201ENST00000419089 348 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM13O60858 AC097713.2-201ENST00000430199 356 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AL158071.1-201ENST00000430315 461 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 MYL8P-204ENST00000431574 518 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AL133396.1-201ENST00000432048 687 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM13O60858 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM13O60858 Z95327.1-201ENST00000446082 482 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 FTH1P2-201ENST00000466086 412 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 RPS26P3-201ENST00000470205 348 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AC090543.2-201ENST00000483963 348 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AC004057.1-201ENST00000485827 348 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM13O60858 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM13O60858 RN7SL812P-201ENST00000493791 279 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AC005798.1-201ENST00000513715 387 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 RNU6-1092P-201ENST00000516955 87 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 RNU6-897P-201ENST00000517135 105 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM13O60858 RANP3-201ENST00000530970 276 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AC008521.1-201ENST00000587471 187 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 AC012669.1-201ENST00000603209 283 ntBASIC4.29□□□□□ -1.72
TRIM13O60858 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM13O60858 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM13O60858 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TRIM13O60858 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM13O60858 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM13O60858 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TRIM13O60858 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM13O60858 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM13O60858 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM13O60858 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM13O60858 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM13O60858 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM13O60858 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM13O60858 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM13O60858 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM13O60858 Y_RNA.526-201ENST00000384572 110 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 Y_RNA.577-201ENST00000384794 101 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 MIR3065-201ENST00000390137 79 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 AL138885.1-201ENST00000405921 675 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 RNA5SP36-201ENST00000410197 133 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM13O60858 AL451074.5-201ENST00000415894 435 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 C4BPAP2-201ENST00000428434 478 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 PSMA2P3-201ENST00000429685 675 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM13O60858 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM13O60858 AL138752.1-201ENST00000452964 351 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM13O60858 LINC01399-202ENST00000458450 244 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 SNORD121B-201ENST00000458838 81 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 AC087884.1-201ENST00000469738 328 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 RN7SL585P-201ENST00000470538 280 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM13O60858 AC093270.2-201ENST00000486157 792 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 AC108145.1-201ENST00000503770 153 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 RBBP4P6-201ENST00000508098 202 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 RNU6-397P-201ENST00000516226 104 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 RNU6-64P-201ENST00000517119 105 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM13O60858 AC010900.2-201ENST00000604508 210 ntBASIC4.28□□□□□ -1.72
TRIM13O60858 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM13O60858 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM13O60858 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM13O60858 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM13O60858 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM13O60858 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM13O60858 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
TRIM13O60858 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms