Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU5E-5P-201ENST00000365379 116 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 RNU6-328P-201ENST00000390887 106 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 FCF1P10-201ENST00000407590 479 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 MIR1284-201ENST00000408337 120 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 RNU6-195P-201ENST00000411352 109 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.12□□□□□ -1.91
CACNA1FO60840 MTND3P23-201ENST00000431980 347 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.12□□□□□ -1.91
CACNA1FO60840 RPS20P5-201ENST00000434808 360 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 LSM1P1-201ENST00000438629 273 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.12□□□□□ -1.91
CACNA1FO60840 MTCO1P48-201ENST00000448024 1096 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AL359385.1-201ENST00000456509 365 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.12□□□□□ -1.91
CACNA1FO60840 AC105914.1-201ENST00000511798 226 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 RN7SKP244-201ENST00000516513 307 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.12□□□□□ -1.91
CACNA1FO60840 CKS1BP7-201ENST00000522230 235 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.12□□□□□ -1.91
CACNA1FO60840 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.12□□□□□ -1.91
CACNA1FO60840 AC007687.1-201ENST00000602704 304 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 MIR6864-201ENST00000617935 70 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
CACNA1FO60840 AC006065.5-201ENST00000623427 349 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CACNA1FO60840 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.12□□□□□ -1.91
CACNA1FO60840 AL157700.1-201ENST00000561973 1432 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 RNU6-433P-201ENST00000363216 104 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1FO60840 AC104389.3-201ENST00000445629 235 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AL590365.1-201ENST00000450788 243 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.11□□□□□ -1.91
CACNA1FO60840 RNU6-583P-201ENST00000516012 92 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.11□□□□□ -1.91
CACNA1FO60840 ARL2BPP5-201ENST00000523141 481 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 OR5D17P-201ENST00000531492 978 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC012182.1-201ENST00000570133 895 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1FO60840 DUXAP4-201ENST00000603046 613 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC112187.2-201ENST00000604345 283 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC103710.3-201ENST00000608157 948 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1FO60840 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1FO60840 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CACNA1FO60840 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CACNA1FO60840 FRG1BP-201ENST00000278882 761 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 RNU6-777P-201ENST00000364265 104 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CACNA1FO60840 RN7SKP140-201ENST00000411196 284 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 RPS3AP3-201ENST00000411933 242 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 USP9YP6-201ENST00000413550 854 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 OR51A5P-201ENST00000415429 942 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.11□□□□□ -1.91
CACNA1FO60840 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.11□□□□□ -1.91
CACNA1FO60840 MTCO3P18-201ENST00000440206 761 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 RPL23AP16-201ENST00000441715 421 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 UBE2V1P7-201ENST00000446395 340 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC003071.1-201ENST00000451219 789 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.11□□□□□ -1.91
CACNA1FO60840 USP9YP34-201ENST00000453983 808 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 BX322784.1-201ENST00000455793 1077 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 MTCO1P42-201ENST00000457379 726 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 RNU7-136P-201ENST00000458819 69 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 RPL37P6-202ENST00000464216 403 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 RPS3AP17-201ENST00000472594 777 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1FO60840 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1FO60840 AC024589.1-201ENST00000512207 263 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AF131216.2-201ENST00000512316 564 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 RNU6-528P-201ENST00000516926 100 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.11□□□□□ -1.91
CACNA1FO60840 AC013828.2-201ENST00000532487 235 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1FO60840 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.11□□□□□ -1.91
CACNA1FO60840 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1FO60840 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.11□□□□□ -1.91
CACNA1FO60840 AC010620.2-201ENST00000600135 313 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 BX664608.1-201ENST00000610519 487 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC008250.2-201ENST00000615261 205 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 AC092881.1-201ENST00000638218 2733 ntBASIC3.11□□□□□ -1.91
CACNA1FO60840 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1FO60840 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CACNA1FO60840 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CACNA1FO60840 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CACNA1FO60840 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CACNA1FO60840 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CACNA1FO60840 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CACNA1FO60840 RN7SKP284-201ENST00000411002 343 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.1□□□□□ -1.91
CACNA1FO60840 RPL7P54-201ENST00000438336 674 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 SNRPEP7-201ENST00000438350 220 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.1□□□□□ -1.91
CACNA1FO60840 MTND3P10-201ENST00000450967 341 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 MTND2P24-201ENST00000453434 806 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 HMGN3P1-201ENST00000453847 193 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 RPL36AP51-201ENST00000487216 318 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.1□□□□□ -1.91
CACNA1FO60840 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms