Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RPL38P4-201ENST00000502376 214 ntBASIC2.3□□□□□ -2.04
CHMP2AO43633 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.3□□□□□ -2.04
CHMP2AO43633 AC098591.2-201ENST00000510152 315 ntBASIC2.3□□□□□ -2.04
CHMP2AO43633 BTF3P12-201ENST00000519620 469 ntBASIC2.3□□□□□ -2.04
CHMP2AO43633 SLC2A13P1-201ENST00000531560 322 ntBASIC2.3□□□□□ -2.04
CHMP2AO43633 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.3□□□□□ -2.04
CHMP2AO43633 AC007115.1-201ENST00000546853 234 ntBASIC2.3□□□□□ -2.04
CHMP2AO43633 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.3□□□□□ -2.04
CHMP2AO43633 AC243773.3-201ENST00000613270 256 ntBASIC2.3□□□□□ -2.04
CHMP2AO43633 AL138955.1-201ENST00000622881 1040 ntBASIC2.3□□□□□ -2.04
CHMP2AO43633 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHMP2AO43633 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHMP2AO43633 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.29□□□□□ -2.04
CHMP2AO43633 AC005539.1-201ENST00000443768 1479 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AL356473.1-201ENST00000406203 1408 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AC004520.1-201ENST00000608362 1413 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 Y_RNA.234-201ENST00000364409 97 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 RNA5SP88-201ENST00000365560 109 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 MIR218-1-201ENST00000384999 110 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 RNU6-952P-201ENST00000391164 108 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 RNU2-2P-201ENST00000410396 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 MRPS36P1-201ENST00000421291 307 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 MTCO2P5-201ENST00000422621 426 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 NANOGP2-201ENST00000435391 727 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AL121890.1-201ENST00000435457 205 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHMP2AO43633 USP9YP8-201ENST00000441913 500 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.29□□□□□ -2.04
CHMP2AO43633 BX322784.1-201ENST00000455793 1077 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.29□□□□□ -2.04
CHMP2AO43633 AC108734.3-201ENST00000481241 1165 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 HMGB1P36-201ENST00000487709 576 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AC023141.11-201ENST00000508864 202 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.29□□□□□ -2.04
CHMP2AO43633 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.29□□□□□ -2.04
CHMP2AO43633 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.29□□□□□ -2.04
CHMP2AO43633 HIGD1AP17-201ENST00000554576 276 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AL132657.2-201ENST00000564417 358 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 RPS3AP23-202ENST00000574601 686 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 MIR5694-201ENST00000581190 76 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 MIR3199-1-201ENST00000582434 88 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.29□□□□□ -2.04
CHMP2AO43633 SNRPGP19-201ENST00000603826 189 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AC021749.1-201ENST00000604322 607 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.15-201ENST00000611544 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.16-201ENST00000613119 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.12-201ENST00000613778 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.20-201ENST00000613956 192 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.9-201ENST00000615427 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.11-201ENST00000616345 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.2-201ENST00000616535 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.3-201ENST00000617785 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.19-201ENST00000618602 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 RNU2-1-201ENST00000618664 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.6-201ENST00000619225 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.5-201ENST00000619465 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 U2.10-201ENST00000620268 191 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AP003485.1-201ENST00000625093 753 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.29□□□□□ -2.04
CHMP2AO43633 MTND1P37-201ENST00000636562 264 ntBASIC2.29□□□□□ -2.04
CHMP2AO43633 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.29□□□□□ -2.04
CHMP2AO43633 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.28□□□□□ -2.04
CHMP2AO43633 SNORD114-1-201ENST00000362705 72 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 SNORD116-12-201ENST00000384468 92 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 MIR524-201ENST00000385242 87 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 RNU6-920P-201ENST00000410926 92 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 AL445646.1-201ENST00000431784 216 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 USP9YP22-201ENST00000438971 294 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 RPL18AP17-201ENST00000455326 198 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.28□□□□□ -2.04
CHMP2AO43633 snoU13.26-201ENST00000459452 105 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.28□□□□□ -2.04
CHMP2AO43633 AC096571.1-202ENST00000506634 735 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 AC112206.4-201ENST00000515142 405 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 RNA5SP291-201ENST00000517222 105 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.28□□□□□ -2.04
CHMP2AO43633 AP000873.5-201ENST00000533906 236 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHMP2AO43633 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
CHMP2AO43633 AP000403.1-201ENST00000603349 851 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 AC069304.2-201ENST00000605154 435 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 AC069545.1-201ENST00000605671 358 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CHMP2AO43633 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.28□□□□□ -2.04
CHMP2AO43633 AL121652.1-201ENST00000608851 448 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 RNU6-1192P-201ENST00000612197 107 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 AC024257.5-201ENST00000612739 531 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 RNU6-489P-201ENST00000618289 107 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.28□□□□□ -2.04
CHMP2AO43633 AC012640.5-201ENST00000623897 319 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 AC004808.1-201ENST00000627671 721 ntBASIC2.28□□□□□ -2.04
CHMP2AO43633 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHMP2AO43633 MTND5P29-201ENST00000458676 1807 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 RNA5SP160-201ENST00000364866 120 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CHMP2AO43633 RNU6-750P-201ENST00000390946 107 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 RNU2-33P-201ENST00000410344 192 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 AL513331.1-201ENST00000411908 397 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms