Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.9□□□□□ -2.11
SGCEO43556 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SGCEO43556 RNU6-223P-201ENST00000362830 107 ntBASIC1.9□□□□□ -2.11
SGCEO43556 MIR17-201ENST00000385012 84 ntBASIC1.9□□□□□ -2.11
SGCEO43556 RNA5SP80-201ENST00000410475 111 ntBASIC1.9□□□□□ -2.11
SGCEO43556 RNA5SP338-201ENST00000410495 85 ntBASIC1.9□□□□□ -2.11
SGCEO43556 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.9□□□□□ -2.11
SGCEO43556 AC005005.2-201ENST00000420779 380 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.9□□□□□ -2.11
SGCEO43556 AC007435.1-201ENST00000421086 415 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.9□□□□□ -2.11
SGCEO43556 GTF2IP7-202ENST00000436677 309 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.9□□□□□ -2.11
SGCEO43556 MTCYBP42-201ENST00000444653 1130 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SGCEO43556 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.9□□□□□ -2.11
SGCEO43556 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.9□□□□□ -2.11
SGCEO43556 RPL30P9-201ENST00000465586 330 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AP002770.2-201ENST00000543613 532 ntBASIC1.9□□□□□ -2.11
SGCEO43556 SNRPGP18-201ENST00000553000 214 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.9□□□□□ -2.11
SGCEO43556 AC009063.1-201ENST00000563342 702 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.9□□□□□ -2.11
SGCEO43556 MIR4765-201ENST00000585007 77 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.9□□□□□ -2.11
SGCEO43556 AC078899.2-201ENST00000595282 212 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.9□□□□□ -2.11
SGCEO43556 AC004987.4-201ENST00000603383 338 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AL139344.1-201ENST00000605228 195 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AC069545.1-201ENST00000605671 358 ntBASIC1.9□□□□□ -2.11
SGCEO43556 uc_338.14-201ENST00000613162 166 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AP003400.5-201ENST00000624827 617 ntBASIC1.9□□□□□ -2.11
SGCEO43556 PISRT1-201ENST00000626175 531 ntBASIC1.9□□□□□ -2.11
SGCEO43556 AC006927.2-201ENST00000639256 389 ntBASIC1.9□□□□□ -2.11
SGCEO43556 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SGCEO43556 Y_RNA.111-201ENST00000363248 100 ntBASIC1.89□□□□□ -2.11
SGCEO43556 CIR1P3-201ENST00000405137 479 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.89□□□□□ -2.11
SGCEO43556 RPL30P4-201ENST00000429309 333 ntBASIC1.89□□□□□ -2.11
SGCEO43556 RPL35AP22-201ENST00000436855 335 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AC004383.1-201ENST00000438135 289 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.89□□□□□ -2.11
SGCEO43556 BTBD7P2-201ENST00000441962 620 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.89□□□□□ -2.11
SGCEO43556 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.89□□□□□ -2.11
SGCEO43556 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
SGCEO43556 AC013267.1-201ENST00000458227 267 ntBASIC1.89□□□□□ -2.11
SGCEO43556 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.89□□□□□ -2.11
SGCEO43556 AC068781.1-201ENST00000488231 618 ntBASIC1.89□□□□□ -2.11
SGCEO43556 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.89□□□□□ -2.11
SGCEO43556 SCARNA16.3-201ENST00000516595 184 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.89□□□□□ -2.11
SGCEO43556 AC118273.2-201ENST00000532092 465 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.89□□□□□ -2.11
SGCEO43556 AC105245.1-201ENST00000581934 244 ntBASIC1.89□□□□□ -2.11
SGCEO43556 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.89□□□□□ -2.11
SGCEO43556 BBIP1P1-201ENST00000602999 279 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AC004805.2-201ENST00000605382 482 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AC008759.3-201ENST00000613300 508 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AP001486.3-201ENST00000615334 372 ntBASIC1.89□□□□□ -2.11
SGCEO43556 AL079343.1-201ENST00000572358 1771 ntBASIC1.89□□□□□ -2.11
SGCEO43556 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.89□□□□□ -2.11
SGCEO43556 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SGCEO43556 MTND5P6-201ENST00000422338 1798 ntBASIC1.88□□□□□ -2.11
SGCEO43556 HSPA8P4-201ENST00000511877 1920 ntBASIC1.88□□□□□ -2.11
SGCEO43556 MIR449A-201ENST00000362113 91 ntBASIC1.88□□□□□ -2.11
SGCEO43556 Y_RNA.245-201ENST00000364493 95 ntBASIC1.88□□□□□ -2.11
SGCEO43556 XGY1-201ENST00000381172 446 ntBASIC1.88□□□□□ -2.11
SGCEO43556 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SGCEO43556 AL590084.2-201ENST00000401481 382 ntBASIC1.88□□□□□ -2.11
SGCEO43556 SNORA11.4-201ENST00000408823 129 ntBASIC1.88□□□□□ -2.11
SGCEO43556 HMGB1P11-201ENST00000413899 637 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AL135786.1-201ENST00000415892 214 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AC093106.2-201ENST00000428212 385 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.88□□□□□ -2.11
SGCEO43556 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.88□□□□□ -2.11
SGCEO43556 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.88□□□□□ -2.11
SGCEO43556 FABP5P14-201ENST00000437273 393 ntBASIC1.88□□□□□ -2.11
SGCEO43556 RNU7-136P-201ENST00000458819 69 ntBASIC1.88□□□□□ -2.11
SGCEO43556 UBE2DNL-203ENST00000474922 222 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AC021382.1-201ENST00000483523 359 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AC092902.1-201ENST00000486999 259 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AC026801.1-201ENST00000497178 464 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.88□□□□□ -2.11
SGCEO43556 AC119751.5-201ENST00000514077 770 ntBASIC1.88□□□□□ -2.11
SGCEO43556 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SGCEO43556 RNU6-1225P-201ENST00000516336 65 ntBASIC1.88□□□□□ -2.11
SGCEO43556 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.88□□□□□ -2.11
SGCEO43556 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.88□□□□□ -2.11
SGCEO43556 SNRPGP1-201ENST00000553864 222 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.88□□□□□ -2.11
SGCEO43556 AC026464.5-201ENST00000562497 722 ntBASIC1.88□□□□□ -2.11
SGCEO43556 MIR3912-201ENST00000577566 105 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AL353997.4-201ENST00000586196 166 ntBASIC1.88□□□□□ -2.11
SGCEO43556 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.88□□□□□ -2.11
SGCEO43556 U4atac.1-201ENST00000618345 95 ntBASIC1.88□□□□□ -2.11
SGCEO43556 AL354685.2-201ENST00000448218 1447 ntBASIC1.88□□□□□ -2.11
SGCEO43556 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms