Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU6-1127P-201ENST00000384580 107 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 RPS26P8-201ENST00000393490 348 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AL591034.1-201ENST00000407447 340 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 MIR1183-201ENST00000408856 89 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.77□□□□□ -1.81
PHGDHO43175 SRIP2-201ENST00000428470 166 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.77□□□□□ -1.81
PHGDHO43175 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.77□□□□□ -1.81
PHGDHO43175 NEK4P1-201ENST00000433383 879 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.77□□□□□ -1.81
PHGDHO43175 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.77□□□□□ -1.81
PHGDHO43175 AC004801.2-202ENST00000463559 283 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 SUMO2P6-201ENST00000505273 288 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AC020593.1-201ENST00000507399 299 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 RN7SKP83-201ENST00000516512 178 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 RNU6-1038P-201ENST00000516516 104 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 SNORA20.3-201ENST00000516880 132 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHGDHO43175 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.77□□□□□ -1.81
PHGDHO43175 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.77□□□□□ -1.81
PHGDHO43175 AC136624.4-201ENST00000573044 370 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PHGDHO43175 AC005730.3-201ENST00000583067 366 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AC244505.7-201ENST00000599675 272 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AL592436.1-201ENST00000605135 558 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.77□□□□□ -1.81
PHGDHO43175 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 uc_338.32-201ENST00000615087 172 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AC092794.2-201ENST00000620933 563 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AF117829.1-206ENST00000621883 3802 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AP003122.6-201ENST00000623831 495 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AC112484.5-201ENST00000624189 228 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 AL049641.1-201ENST00000441055 1948 ntBASIC3.77□□□□□ -1.81
PHGDHO43175 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.77□□□□□ -1.81
PHGDHO43175 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PHGDHO43175 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHGDHO43175 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHGDHO43175 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PHGDHO43175 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PHGDHO43175 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHGDHO43175 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.76□□□□□ -1.81
PHGDHO43175 AF127577.6-201ENST00000623352 2191 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PHGDHO43175 ZNF807-201ENST00000328088 1707 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.76□□□□□ -1.81
PHGDHO43175 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PHGDHO43175 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
PHGDHO43175 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PHGDHO43175 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.76□□□□□ -1.81
PHGDHO43175 RNA5SP97-201ENST00000365006 84 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 RNU6-715P-201ENST00000365204 103 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 SNORA70C-201ENST00000384538 135 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 MIR301A-201ENST00000385261 86 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 RNA5SP317-201ENST00000410176 116 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 RNA5SP311-201ENST00000411290 116 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 EEF1A1P40-201ENST00000412883 573 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 AC063979.1-201ENST00000415539 377 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.76□□□□□ -1.81
PHGDHO43175 FABP5P15-201ENST00000453566 214 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 RNA5SP310-201ENST00000459084 116 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.76□□□□□ -1.81
PHGDHO43175 CCDC34P1-201ENST00000507441 517 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.76□□□□□ -1.81
PHGDHO43175 RNA5SP315-201ENST00000516340 116 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 RNA5SP312-201ENST00000517068 116 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PHGDHO43175 MIR4697-201ENST00000582977 78 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 AC083809.1-201ENST00000615051 472 ntBASIC3.76□□□□□ -1.81
PHGDHO43175 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PHGDHO43175 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.76□□□□□ -1.81
PHGDHO43175 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PHGDHO43175 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PHGDHO43175 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PHGDHO43175 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PHGDHO43175 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PHGDHO43175 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PHGDHO43175 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PHGDHO43175 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PHGDHO43175 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PHGDHO43175 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PHGDHO43175 SNORD70.1-201ENST00000391007 85 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 AL162578.1-201ENST00000406202 378 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 FAT1P1-201ENST00000406588 507 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 RNU4-26P-201ENST00000410270 107 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.75□□□□□ -1.81
PHGDHO43175 AC009161.1-201ENST00000417306 376 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.75□□□□□ -1.81
PHGDHO43175 RPL21P111-201ENST00000418453 477 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 ARL5AP1-201ENST00000418991 388 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 AL513185.2-201ENST00000425543 193 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 RPS15AP27-201ENST00000449183 343 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.75□□□□□ -1.81
PHGDHO43175 CECR9-201ENST00000453421 199 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 RPL21P41-201ENST00000459863 264 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 HMGN2P26-201ENST00000463169 339 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 AL135752.1-201ENST00000479477 471 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 AC012181.1-201ENST00000479895 423 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 RN7SKP209-201ENST00000516888 304 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 RNU6-1315P-201ENST00000517187 99 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms