Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 MTND4P29-201ENST00000503122 1372 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 RNU4-73P-201ENST00000363164 141 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 SNORD113-7-201ENST00000363762 77 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 RNU6-371P-201ENST00000364283 108 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 RNU4-76P-201ENST00000364509 141 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 Y_RNA.373-201ENST00000365600 103 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 BX842559.1-201ENST00000419615 532 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AL590383.1-201ENST00000428602 75 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC083904.1-201ENST00000487828 231 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC096576.1-201ENST00000489014 359 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC103851.1-201ENST00000506833 274 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 RNU6-237P-201ENST00000515985 71 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 SNORA19.2-201ENST00000516013 114 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC012493.2-201ENST00000595083 291 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC092747.3-201ENST00000603769 301 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 CTHRC1P1-201ENST00000605383 469 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 Z82243.1-201ENST00000609432 473 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 U2.17-201ENST00000611454 95 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC022418.1-201ENST00000624118 445 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC008013.2-202ENST00000637965 364 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 MAPK10-372ENST00000641954 3413 ntBASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCDC85CA6NKD9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 Y_RNA.212-201ENST00000364177 102 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 Y_RNA.356-201ENST00000365475 113 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 HSPE1P8-201ENST00000406997 288 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 MIR1251-201ENST00000408552 70 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 RPL21P23-201ENST00000446654 460 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 FABP5P15-201ENST00000453566 214 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 RPL21P41-201ENST00000459863 264 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 RPL21P104-201ENST00000464143 478 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 RN7SL271P-201ENST00000487601 295 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AL160314.1-201ENST00000490836 438 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC005498.1-201ENST00000592125 465 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC015914.2-201ENST00000618167 288 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC022140.2-201ENST00000623500 188 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AL359693.1-201ENST00000614959 2407 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 AC093908.1-201ENST00000623125 8092 ntBASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC85CA6NKD9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 AL353743.1-202ENST00000431724 1695 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 AC126323.6-202ENST00000568092 3511 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 Y_RNA.301-201ENST00000364990 103 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 RNA5SP97-201ENST00000365006 84 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 Y_RNA.535-201ENST00000384612 99 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 NDUFB4P5-201ENST00000415445 361 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 RPLP0P7-201ENST00000416050 667 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 RPS6P12-201ENST00000432491 726 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 AC073063.1-201ENST00000434352 607 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 SUMO2P6-201ENST00000505273 288 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 RNA5SP230-201ENST00000517039 122 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 AL451007.1-201ENST00000595491 289 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 AC090740.1-201ENST00000623193 2262 ntBASIC4.55□□□□□ -1.68
CCDC85CA6NKD9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms