Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 Y_RNA.771-201ENST00000598668 102 ntBASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 Y_RNA.789-201ENST00000622480 102 ntBASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 AC027309.3-201ENST00000623419 351 ntBASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HRH3Q9Y5N1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 RN7SKP185-201ENST00000362813 326 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 Y_RNA.81-201ENST00000362997 102 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 Y_RNA.398-201ENST00000383952 99 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 RNU6-541P-201ENST00000384709 110 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 RNU6-918P-201ENST00000391219 106 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 SNORD12B-201ENST00000410433 91 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 CTSL3P-202ENST00000412179 788 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 RPL23AP36-201ENST00000413895 458 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AC140479.3-201ENST00000418944 1126 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AC091390.3-201ENST00000426478 338 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AL078601.1-201ENST00000444542 271 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 RN7SL188P-201ENST00000469842 285 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 RN7SL222P-201ENST00000476452 299 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 RPL23AP75-201ENST00000491601 451 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 SCARNA15.2-201ENST00000516409 127 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AP005660.1-201ENST00000522972 293 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AP004607.2-201ENST00000533949 322 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AL390726.5-202ENST00000564800 256 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AC024940.4-201ENST00000605507 246 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AC108706.1-201ENST00000611053 297 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 AL049539.1-201ENST00000611964 459 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 MTND1P7-201ENST00000632801 297 ntBASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HRH3Q9Y5N1 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 RNU6-923P-201ENST00000364753 107 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 Y_RNA.286-201ENST00000364813 102 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 Y_RNA.343-201ENST00000365354 112 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 MIR32-201ENST00000384965 70 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 MIR551A-201ENST00000385042 96 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AL645927.1-201ENST00000396783 406 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 GPS2P1-201ENST00000411761 986 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 EIF1AXP1-201ENST00000419267 435 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC006026.2-201ENST00000457376 180 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 SNORD125-201ENST00000459538 96 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AL049830.2-201ENST00000480072 201 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC231760.1-201ENST00000498002 260 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 RNU6-572P-201ENST00000516724 80 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC233702.9-201ENST00000581528 203 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 AC073349.3-201ENST00000617616 186 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 SCARNA4-202ENST00000625402 129 ntBASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.97□□□□□ -1.61
HRH3Q9Y5N1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.96□□□□□ -1.61
HRH3Q9Y5N1 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.61
HRH3Q9Y5N1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HRH3Q9Y5N1 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.96□□□□□ -1.61
HRH3Q9Y5N1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HRH3Q9Y5N1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms