Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.24-201ENST00000362508 103 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 U8.6-201ENST00000364939 135 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-245P-201ENST00000384020 107 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.572-201ENST00000384757 98 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 SNORA75.5-201ENST00000391291 81 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 MIR888-201ENST00000401186 77 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 RPL17P36-201ENST00000420302 549 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 AC091390.3-201ENST00000426478 338 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 ANP32BP2-201ENST00000454525 545 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 RNA5SP434-201ENST00000516647 121 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 AC021006.3-201ENST00000530771 192 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 MIR4660-201ENST00000583549 74 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 AC083899.1-201ENST00000454465 3819 ntBASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA4Q9Y5G9 AP001642.1-201ENST00000624727 2117 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 MIR548A3-201ENST00000385297 97 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-1245P-201ENST00000411130 106 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 HMGA1P8-201ENST00000414130 321 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AC112220.1-201ENST00000434628 355 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AL714022.1-201ENST00000439897 151 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AC243964.1-201ENST00000441814 261 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 snoU13.3-201ENST00000459441 104 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AC114781.3-201ENST00000512083 142 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 RNA5SP54-201ENST00000516951 92 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AL353748.2-201ENST00000622148 471 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 SNORA43.4-201ENST00000629559 138 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 AL049767.1-202ENST00000637826 242 ntBASIC5.9□□□□□ -1.46
PCDHGA4Q9Y5G9 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.9□□□□□ -1.47
PCDHGA4Q9Y5G9 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA4Q9Y5G9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PCDHGA4Q9Y5G9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.9□□□□□ -1.47
PCDHGA4Q9Y5G9 AC093591.2-201ENST00000565254 3843 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC068700.1-201ENST00000565862 3754 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU1-146P-201ENST00000364015 165 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-294P-201ENST00000364999 102 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 MIR514A1-201ENST00000385133 98 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 SNORA26.5-201ENST00000391215 123 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 RPL36AP39-201ENST00000445859 318 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 EIF4A1P11-201ENST00000451239 222 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC245047.8-201ENST00000456455 284 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 RN7SL629P-201ENST00000489622 285 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC146944.2-203ENST00000502493 354 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC139495.1-202ENST00000513164 354 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 RNA5SP438-201ENST00000516561 112 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC106754.2-201ENST00000623006 233 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AL672167.1-205ENST00000641112 3080 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 AC079753.1-201ENST00000623243 3868 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 PCAT14-202ENST00000627127 3935 ntBASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PCDHGA4Q9Y5G9 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms