Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AL662874.1-201ENST00000426065 230 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 GSTM5P1-201ENST00000434751 660 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 FABP5P15-201ENST00000453566 214 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 OR2AO1P-201ENST00000476497 403 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AC133555.2-201ENST00000550213 292 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AC022968.1-201ENST00000567372 442 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AL353743.1-202ENST00000431724 1695 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 AC144833.1-201ENST00000567953 4089 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 SNORA64.1-201ENST00000362600 132 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-78P-201ENST00000362897 107 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RN7SKP145-201ENST00000363291 303 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 Y_RNA.319-201ENST00000365138 92 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-1144P-201ENST00000384247 104 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-376P-201ENST00000384731 106 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-381P-201ENST00000391259 108 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AC004129.2-201ENST00000457229 287 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 HSPE1P6-201ENST00000479457 291 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-615P-201ENST00000516065 106 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AC100767.1-201ENST00000528178 123 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AC024940.4-201ENST00000605507 246 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AC099654.2-201ENST00000433031 1980 ntBASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB3Q9Y5E6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 BCORP1-203ENST00000513194 5093 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-147P-201ENST00000383983 107 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 SNORA40C-201ENST00000391285 128 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 RNU7-197P-201ENST00000458836 62 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 RNU1-88P-201ENST00000459274 128 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 RPS23P6-201ENST00000466136 431 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 AP004242.1-201ENST00000533701 349 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 MIR6133-201ENST00000617057 108 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 AC092628.2-201ENST00000622492 339 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 CU639417.4-201ENST00000623928 207 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 AC048347.1-201ENST00000624621 427 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 PHKBP1-201ENST00000450951 1951 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 MTND5P32-201ENST00000560711 1802 ntBASIC5.51□□□□□ -1.53
PCDHB3Q9Y5E6 FAM91A3P-201ENST00000456826 2544 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms