Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC105224.1-201ENST00000587055 421 ntBASIC3.21□□□□□ -1.9
YIPF1Q9Y548 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.21□□□□□ -1.9
YIPF1Q9Y548 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.21□□□□□ -1.9
YIPF1Q9Y548 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.21□□□□□ -1.9
YIPF1Q9Y548 AC013562.2-201ENST00000611632 603 ntBASIC3.21□□□□□ -1.9
YIPF1Q9Y548 AC087241.4-201ENST00000612441 480 ntBASIC3.21□□□□□ -1.9
YIPF1Q9Y548 MIR6852-201ENST00000621699 66 ntBASIC3.21□□□□□ -1.9
YIPF1Q9Y548 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
YIPF1Q9Y548 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.21□□□□□ -1.9
YIPF1Q9Y548 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
YIPF1Q9Y548 MTND5P29-201ENST00000458676 1807 ntBASIC3.21□□□□□ -1.9
YIPF1Q9Y548 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
YIPF1Q9Y548 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
YIPF1Q9Y548 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC007256.1-201ENST00000392253 2765 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 DEFB108F-201ENST00000344638 222 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 RNU5A-1-201ENST00000362698 116 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 RN7SKP226-201ENST00000364912 300 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 RNU6-169P-201ENST00000365336 107 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 ZNF885P-201ENST00000420174 1098 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC008850.1-201ENST00000427546 362 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC137499.1-201ENST00000427602 88 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC022018.1-201ENST00000430685 241 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AL139132.1-201ENST00000431587 344 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 BX679664.1-201ENST00000434429 253 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 GAPDHP27-201ENST00000447427 1020 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AL136380.1-201ENST00000447970 162 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AL359385.1-201ENST00000456509 365 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 RPL23AP14-201ENST00000468281 468 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 HSPE1P6-201ENST00000479457 291 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 RNU6-840P-201ENST00000517275 65 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC068790.2-201ENST00000602601 557 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AL136363.1-201ENST00000605349 337 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 SNHG22-203ENST00000617833 660 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC136475.10-201ENST00000620253 385 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 PLCE1P1-201ENST00000622094 305 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC138649.3-201ENST00000622154 254 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC073476.4-201ENST00000628409 72 ntBASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.2□□□□□ -1.9
YIPF1Q9Y548 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 SNORD56.2-201ENST00000363242 71 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 RNU6-511P-201ENST00000363496 107 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 RNY1P12-201ENST00000364251 105 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 U3.11-201ENST00000364476 212 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 RNU6-39P-201ENST00000384344 107 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 MIR591-201ENST00000385290 95 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 SNORA11.2-201ENST00000408318 127 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 RN7SKP285-201ENST00000410137 318 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 RNU2-36P-201ENST00000410361 191 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 RNA5SP31-201ENST00000411144 127 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 EEF1A1P41-201ENST00000414667 207 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AC018630.2-202ENST00000422992 927 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 C1DP4-201ENST00000455429 424 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AL049874.1-201ENST00000489560 388 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AC091133.4-201ENST00000511142 308 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AP003033.1-201ENST00000527244 415 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 MIR5047-201ENST00000579212 100 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 AC010133.1-201ENST00000615809 842 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 OR5AK4P-201ENST00000635912 903 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 MIR4275-201ENST00000636486 87 ntBASIC3.19□□□□□ -1.9
YIPF1Q9Y548 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 256.4 ms