Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NOD1Q9Y239 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.35□□□□□ -1.55
NOD1Q9Y239 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NOD1Q9Y239 AL365440.1-201ENST00000436135 2167 ntBASIC5.35□□□□□ -1.55
NOD1Q9Y239 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NOD1Q9Y239 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NOD1Q9Y239 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NOD1Q9Y239 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NOD1Q9Y239 RNA5SP453-201ENST00000362503 119 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 RNU1-76P-201ENST00000362903 159 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 RN7SKP227-201ENST00000364445 330 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 RNU6-200P-201ENST00000364743 107 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 RNU6-708P-201ENST00000384217 107 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 U3.22-201ENST00000391120 215 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 SNORA11-201ENST00000408789 128 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 RNA5SP494-201ENST00000410653 129 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 RPL23AP1-201ENST00000428990 471 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 GZMAP1-201ENST00000503054 631 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 MLLT10P2-201ENST00000506434 249 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 AL110118.1-201ENST00000553543 400 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 AL355877.2-201ENST00000603670 358 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 AL356218.2-201ENST00000605264 187 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 AL360181.4-201ENST00000621752 134 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 MIR6830-201ENST00000636015 70 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 MIR6715B-201ENST00000637172 77 ntBASIC5.34□□□□□ -1.55
NOD1Q9Y239 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NOD1Q9Y239 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
NOD1Q9Y239 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
NOD1Q9Y239 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NOD1Q9Y239 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
NOD1Q9Y239 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NOD1Q9Y239 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NOD1Q9Y239 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NOD1Q9Y239 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NOD1Q9Y239 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NOD1Q9Y239 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NOD1Q9Y239 SNORD113.2-201ENST00000364166 89 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 RNA5SP235-201ENST00000365411 114 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 MIR129-1-201ENST00000384972 72 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 RNU6-121P-201ENST00000410525 99 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 RNU6-130P-201ENST00000411112 103 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 AL590135.1-201ENST00000422215 156 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 RPS17P8-201ENST00000434525 335 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 AC000111.2-201ENST00000448200 210 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 AL162591.2-201ENST00000449634 317 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 RNU1-6P-201ENST00000516290 144 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 RNA5SP392-201ENST00000516905 112 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 HMGB1P14-201ENST00000557424 591 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 SNORA74C-1-201ENST00000580726 201 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 AC006557.5-201ENST00000603126 811 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 AC073410.2-201ENST00000603240 332 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 AL121932.1-201ENST00000605542 214 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NOD1Q9Y239 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 AP000560.1-201ENST00000624150 1937 ntBASIC5.33□□□□□ -1.56
NOD1Q9Y239 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NOD1Q9Y239 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NOD1Q9Y239 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NOD1Q9Y239 RNA5SP447-201ENST00000363749 119 ntBASIC5.32□□□□□ -1.56
NOD1Q9Y239 RNA5SP296-201ENST00000410523 111 ntBASIC5.32□□□□□ -1.56
NOD1Q9Y239 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 RPL17P36-201ENST00000420302 549 ntBASIC5.32□□□□□ -1.56
NOD1Q9Y239 TOMM20P4-201ENST00000427861 435 ntBASIC5.32□□□□□ -1.56
NOD1Q9Y239 MYL8P-204ENST00000431574 518 ntBASIC5.32□□□□□ -1.56
NOD1Q9Y239 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 RPL23AP45-201ENST00000476406 468 ntBASIC5.32□□□□□ -1.56
NOD1Q9Y239 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.32□□□□□ -1.56
NOD1Q9Y239 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms