Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RNA5SP296-201ENST00000410523 111 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 MTATP6P4-201ENST00000427725 675 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 SNAP23P1-201ENST00000433229 246 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 FABP5P14-201ENST00000437273 393 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 DEFB109F-201ENST00000491870 277 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 AC005741.1-201ENST00000511094 432 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 RNU2-69P-201ENST00000516061 100 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 APOOP3-201ENST00000536787 586 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 AC006270.2-201ENST00000578523 652 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 MIR432-201ENST00000606207 94 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 AC140113.4-201ENST00000622087 222 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 EOGT-210ENST00000615922 1931 ntBASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNRF3Q9ULT6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 MTCO1P12-201ENST00000414273 1543 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AL360182.1-201ENST00000397433 468 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 RNU6-1304P-201ENST00000411374 106 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 RPS29P4-201ENST00000414733 161 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 RPL21P109-201ENST00000422213 475 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 MTND1P17-201ENST00000448961 204 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 RPL37P6-201ENST00000460682 294 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC090096.1-201ENST00000489168 390 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC008526.1-201ENST00000509149 338 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC074250.1-201ENST00000511117 192 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 SNORA14.1-201ENST00000516113 141 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AP004371.1-201ENST00000525240 214 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AL163153.1-201ENST00000554223 283 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AL355836.1-201ENST00000555951 870 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 MIR5690-201ENST00000583739 73 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 CYP2C61P-201ENST00000604072 290 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AL080274.1-201ENST00000605565 220 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC124303.1-201ENST00000605703 360 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 AC133104.2-201ENST00000615272 193 ntBASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNRF3Q9ULT6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 Z73965.1-201ENST00000623412 2297 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 AC083843.3-201ENST00000623679 2186 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 RNA5SP399-201ENST00000364003 117 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 Y_RNA.202-201ENST00000364083 110 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 SNORD116-11-201ENST00000383882 92 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 Y_RNA.422-201ENST00000384054 114 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 U1.1-201ENST00000384101 164 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 RNU6-601P-201ENST00000384540 107 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 MIR195-201ENST00000385194 87 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 AL121834.1-202ENST00000404494 277 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 AL035423.1-201ENST00000420331 213 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 AL160275.3-201ENST00000423876 471 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 AP000907.1-201ENST00000428428 510 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 AC008264.1-201ENST00000447612 367 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 RNU7-152P-201ENST00000458982 64 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 Y_RNA.653-201ENST00000459091 95 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 MLLT10P2-201ENST00000506434 249 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 SCARNA14-201ENST00000516903 136 ntBASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNRF3Q9ULT6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms