Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HDAC9Q9UKV0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.09□□□□□ -1.75
HDAC9Q9UKV0 ELF2P3-201ENST00000445099 1506 ntBASIC4.09□□□□□ -1.75
HDAC9Q9UKV0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.09□□□□□ -1.76
HDAC9Q9UKV0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HDAC9Q9UKV0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HDAC9Q9UKV0 AF117829.1-206ENST00000621883 3802 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AL357075.1-201ENST00000404107 726 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 CIR1P3-201ENST00000405137 479 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 RPS3AP24-201ENST00000407896 734 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 RNU2-43P-201ENST00000410306 190 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC017079.2-201ENST00000416102 485 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 OOSP1P1-201ENST00000423265 274 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC137499.1-201ENST00000427602 88 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC090774.1-201ENST00000435925 246 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 CR848007.1-201ENST00000442354 1699 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC016696.1-201ENST00000446949 318 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AL121769.1-201ENST00000469473 401 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC009646.1-201ENST00000510455 318 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 RNU6-718P-201ENST00000516166 105 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 RNU6-64P-201ENST00000517119 105 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AK6P1-201ENST00000540219 478 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 SUB1P2-201ENST00000556401 297 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 MIR3945-201ENST00000581853 98 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC012443.1-201ENST00000605605 231 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AC017083.3-201ENST00000609955 700 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 AL136313.1-201ENST00000624804 202 ntBASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
HDAC9Q9UKV0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 TAB3P1-202ENST00000452645 1634 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 RNA5SP42-201ENST00000364278 115 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 Y_RNA.248-201ENST00000364501 109 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 RNU6-108P-201ENST00000365558 107 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 RNU6-882P-201ENST00000391025 103 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL109755.1-201ENST00000401791 649 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL139095.1-201ENST00000404326 391 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AMD1P2-201ENST00000412936 992 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL139413.1-201ENST00000421309 217 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AC023194.1-201ENST00000493084 308 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AC026801.2-201ENST00000515352 425 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 SCARNA24.1-201ENST00000516465 137 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AC125611.2-201ENST00000551907 647 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 MED28P6-201ENST00000558776 231 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL162713.1-201ENST00000604480 262 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL022099.1-201ENST00000604551 712 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AC008277.2-201ENST00000605196 797 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AL034351.1-201ENST00000605288 668 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 AC007256.1-201ENST00000392253 2765 ntBASIC4.07□□□□□ -1.76
HDAC9Q9UKV0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms