Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 LARP1BP2-201ENST00000486594 519 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 TPT1P8-201ENST00000510120 555 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AF213884.2-201ENST00000510417 903 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 RNA5SP137-201ENST00000516833 135 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 MIR4648-201ENST00000580107 72 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AC105245.1-201ENST00000581934 244 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AP001269.3-201ENST00000588718 329 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AL161729.4-201ENST00000604650 476 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 LINC00216-201ENST00000623548 1126 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 GDI2P1-201ENST00000429312 1336 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 U8.2-201ENST00000363156 134 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AL121978.1-201ENST00000402778 359 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 U6atac.2-201ENST00000408644 118 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 RNA5SP450-201ENST00000411206 102 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 RPL30P4-201ENST00000429309 333 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 Z82210.1-201ENST00000440037 231 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 SNRPGP13-201ENST00000442212 177 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 HMGB1P36-201ENST00000487709 576 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 MTCO1P31-201ENST00000506355 492 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AC022483.1-201ENST00000514020 567 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 CR383656.7-201ENST00000548164 174 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AL160236.1-201ENST00000556317 195 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 MIR3126-201ENST00000577443 74 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 NRBF2P1-201ENST00000587407 859 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 AP000403.1-201ENST00000603349 851 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 BNIP3P4-201ENST00000604946 565 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.24□□□□□ -2.21
COMMD3Q9UBI1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 MIR517C-201ENST00000385103 95 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 MIR934-201ENST00000401241 83 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 RNU2-15P-201ENST00000410692 191 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 OR9R1P-201ENST00000412200 877 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 VN1R36P-201ENST00000414936 291 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AL354695.1-201ENST00000427935 228 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AC118469.1-201ENST00000442943 488 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 RPL12P25-201ENST00000455592 494 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 UBE2DNL-203ENST00000474922 222 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 RNU6-1256P-201ENST00000516539 103 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AC008269.2-201ENST00000561915 1105 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AC012435.1-202ENST00000568772 240 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AF131215.7-201ENST00000602443 707 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AL031176.1-201ENST00000604554 466 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 PISRT1-201ENST00000626175 531 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 AL590396.2-201ENST00000636511 1041 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.23□□□□□ -2.21
COMMD3Q9UBI1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 RNU6-1140P-201ENST00000410517 106 ntBASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 UBE2FP1-201ENST00000416536 447 ntBASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AC021146.2-201ENST00000504736 556 ntBASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 RANP3-201ENST00000530970 276 ntBASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AC007349.4-201ENST00000608114 532 ntBASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COMMD3Q9UBI1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms