Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
DNMT3BQ9UBC3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
DNMT3BQ9UBC3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
DNMT3BQ9UBC3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
DNMT3BQ9UBC3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
DNMT3BQ9UBC3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DNMT3BQ9UBC3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RPL7P26-201ENST00000333817 754 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 Y_RNA.160-201ENST00000363677 92 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 SNORA51.2-201ENST00000364595 132 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-61P-201ENST00000365528 109 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AL356776.1-201ENST00000406574 447 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RPL30P2-201ENST00000414021 291 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RPL21P66-201ENST00000426566 466 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 NEFMP1-201ENST00000443423 1006 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RBMY2UP-201ENST00000453474 324 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC092451.1-201ENST00000480211 153 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RPL38P4-201ENST00000502376 214 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC026784.1-201ENST00000507986 352 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RN7SKP219-201ENST00000516825 296 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 Y_RNA.702-201ENST00000516843 96 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 NARSP2-201ENST00000518524 679 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 MIR4703-201ENST00000577728 79 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC024619.4-201ENST00000580924 316 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC005730.3-201ENST00000583067 366 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC174048.1-201ENST00000603389 144 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AP001330.4-201ENST00000604350 154 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 RMST_3.1-201ENST00000611651 109 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AL355810.1-201ENST00000614629 552 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AL355365.1-201ENST00000616480 294 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 LINC02471-203ENST00000641941 4752 ntBASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
DNMT3BQ9UBC3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC032011.1-201ENST00000611703 1549 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 MTND4P14-201ENST00000435799 1354 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 RNA5SP189-201ENST00000364920 115 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 MIR607-201ENST00000385241 96 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 DBIP2-201ENST00000419076 262 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC018630.2-202ENST00000422992 927 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 CALM2P2-201ENST00000428512 440 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC020550.1-201ENST00000447385 163 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 RPS20P20-201ENST00000460498 340 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 EIF4EP3-201ENST00000498782 656 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC005921.1-201ENST00000510589 286 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 RN7SKP258-201ENST00000517151 304 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AP006587.4-201ENST00000526053 529 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 BNIP3P10-201ENST00000605360 577 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC008945.2-201ENST00000606056 604 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC025253.1-201ENST00000613623 543 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC063943.3-201ENST00000615562 356 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC004825.2-201ENST00000616634 455 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AC011155.2-201ENST00000623202 216 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 MIR3651-201ENST00000630427 90 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms