Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 RNU4-13P-201ENST00000364019 141 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 MIR325-201ENST00000385260 98 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 MIR1290-201ENST00000408735 78 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 RNU6-321P-201ENST00000410912 106 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 RPL23AP36-201ENST00000413895 458 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AL136380.1-201ENST00000447970 162 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 SUMO2P2-201ENST00000456482 255 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AL049714.1-201ENST00000466686 347 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 RPS15AP34-201ENST00000487776 387 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 NDUFS5P6-201ENST00000529136 295 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 MIR3609-201ENST00000582661 80 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC084824.5-201ENST00000612009 413 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC079395.3-201ENST00000615161 484 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 HPVC1-201ENST00000629899 1198 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC132825.7-201ENST00000638744 335 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 CR848007.1-201ENST00000442354 1699 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 RNU6-1066P-201ENST00000363573 105 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 RNU2-43P-201ENST00000410306 190 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 MTCO3P1-205ENST00000422088 832 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 GPM6BP3-201ENST00000442797 145 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AL500527.1-201ENST00000448532 255 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC091860.1-201ENST00000505723 432 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC006499.2-201ENST00000513470 337 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 SCARNA17.1-201ENST00000516211 143 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 SCARNA17.2-201ENST00000516334 143 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC025755.1-201ENST00000521306 278 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 ARL2BPP2-201ENST00000550907 489 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 HMGB1P14-201ENST00000557424 591 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 SULT1C2P1-202ENST00000562418 459 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC023043.2-201ENST00000589678 1026 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AL355877.2-201ENST00000603670 358 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 SCARNA17.4-201ENST00000614296 143 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC109454.4-201ENST00000623411 649 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 MIR4275-201ENST00000636486 87 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 CCT4P2-201ENST00000233836 1548 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 RNU6-1155P-201ENST00000363554 107 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 RNU1-52P-201ENST00000384190 164 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AL133264.1-201ENST00000407157 562 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC099548.1-201ENST00000421443 426 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 HMGB1P9-201ENST00000429856 646 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 OR4K11P-201ENST00000431829 904 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC090774.1-201ENST00000435925 246 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 MTND4P15-201ENST00000437913 1033 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC108729.2-201ENST00000476543 840 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 RPS27P21-201ENST00000486977 252 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 MTCO2P9-201ENST00000503214 694 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC117522.2-201ENST00000510049 657 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 RNU5F-8P-201ENST00000515941 111 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 SNORA31.18-201ENST00000517043 134 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 snoZ278.1-201ENST00000517059 112 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 ANP32BP3-201ENST00000559213 706 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 AP000943.4-201ENST00000622912 357 ntBASIC1.56□□□□□ -2.16
CCDC88CQ9P219 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC88CQ9P219 MTCO1P23-201ENST00000415223 1526 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC009902.3-201ENST00000606235 2172 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 SNORA68.1-201ENST00000364537 132 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 SNORA46.1-201ENST00000391069 153 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 RPL31P54-201ENST00000429803 370 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 MICF-203ENST00000432679 129 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 OR10R1P-201ENST00000441524 1141 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 RNA5SP233-201ENST00000459153 113 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 RNA5SP471-201ENST00000516971 106 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms