Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL356421.1-201ENST00000403255 413 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 SRIP2-201ENST00000428470 166 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 UBE2FP3-201ENST00000436366 524 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 SNRPEP9-201ENST00000436794 238 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AL831737.1-201ENST00000441288 271 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 GPM6BP3-201ENST00000442797 145 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 MTND1P9-201ENST00000453775 944 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC092902.1-201ENST00000486999 259 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 SCARNA3-201ENST00000517097 143 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 RNU6-1028P-201ENST00000517164 93 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC007151.1-201ENST00000572774 483 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AL353997.4-201ENST00000586196 166 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AF038458.1-201ENST00000588406 262 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC004805.2-201ENST00000605382 482 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC120053.1-201ENST00000607706 736 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 TUG1_2.1-201ENST00000614234 87 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC025034.2-201ENST00000623264 286 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AC110491.1-201ENST00000562191 2010 ntBASIC1.99□□□□□ -2.09
VAPAQ9P0L0 AL365361.1-201ENST00000566942 3481 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 KPNA2P1-201ENST00000458289 1591 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 ELF2P3-201ENST00000445099 1506 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 RNA5SP125-201ENST00000364843 120 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 RNU6-754P-201ENST00000391166 107 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AL590084.2-201ENST00000401481 382 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 BTF3P7-201ENST00000407097 488 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 RNU2-72P-201ENST00000411175 163 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 OR4K6P-201ENST00000416478 897 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 UBE2FP1-201ENST00000416536 447 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 NPM1P11-201ENST00000417106 855 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 MTND4P3-201ENST00000417829 541 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 USP9YP21-201ENST00000420603 432 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 COX7BP2-201ENST00000437976 242 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 MTND5P14-201ENST00000441481 1267 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 USP9YP8-201ENST00000441913 500 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 MTND1P31-201ENST00000449206 961 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AC128713.1-201ENST00000471495 306 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AC069528.1-202ENST00000482888 637 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 RNU6-150P-201ENST00000516237 95 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AP001646.1-201ENST00000527936 915 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AC009237.15-201ENST00000610252 501 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AL512427.1-201ENST00000618593 349 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AP002791.1-201ENST00000623291 381 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AP003485.1-201ENST00000625093 753 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 MIR3199-2-201ENST00000636243 86 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 AC099063.3-201ENST00000642066 185 ntBASIC1.98□□□□□ -2.09
VAPAQ9P0L0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
VAPAQ9P0L0 MTND4P1-201ENST00000457501 1466 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 RNU6-224P-201ENST00000384055 107 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 RNU6-432P-201ENST00000384196 109 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 NDUFS5P4-201ENST00000412983 318 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 EIF4EP4-201ENST00000424916 578 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 SKA2P1-201ENST00000425592 390 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 ZYG11AP1-201ENST00000430329 837 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC010153.1-201ENST00000432862 727 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC098831.1-201ENST00000440661 216 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms