Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 Y_RNA.422-201ENST00000384054 114 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 MIR192-201ENST00000384915 110 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 SNORA16.2-201ENST00000390991 127 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 MIR450B-201ENST00000401182 78 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 RNA5SP36-201ENST00000410197 133 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 ELOCP19-201ENST00000411919 318 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AL160275.3-201ENST00000423876 471 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AL162151.2-201ENST00000448875 158 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 RPL23AP24-201ENST00000458203 385 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 snoU13.24-201ENST00000458998 104 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 DYNLL1P5-201ENST00000467158 270 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 RNU2-69P-201ENST00000516061 100 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 FRG2DP-202ENST00000566967 323 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 MIR4790-201ENST00000577799 79 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 MIR5690-201ENST00000583739 73 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 MIR4715-201ENST00000584117 79 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 MIR3672-201ENST00000584290 82 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 MIR3942-201ENST00000585264 109 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 APOOP1-201ENST00000604695 592 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AC245389.1-201ENST00000605141 529 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AC139713.2-214ENST00000642059 1811 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 MTND4P27-201ENST00000450813 1354 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 AL158163.1-201ENST00000603915 1649 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 Y_RNA.162-201ENST00000363683 102 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 Y_RNA.326-201ENST00000365176 113 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 SNORD116-11-201ENST00000383882 92 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 Y_RNA.482-201ENST00000384377 111 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 RNU6-328P-201ENST00000390887 106 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 CISD1P1-201ENST00000393907 327 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 BX323014.1-201ENST00000412876 237 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AL353729.1-201ENST00000425044 720 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 RPS29P17-201ENST00000430795 166 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 FABP5P14-201ENST00000437273 393 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AP000873.1-201ENST00000463987 400 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 RN7SL738P-201ENST00000470264 297 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 PPIAP15-201ENST00000479662 484 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC092451.1-201ENST00000480211 153 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC078817.1-201ENST00000492623 435 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AP002812.1-201ENST00000495378 474 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AL359273.1-201ENST00000510918 627 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 RNA5SP49-201ENST00000516450 115 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 RNA5SP519-201ENST00000516480 119 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 RNU6-1069P-201ENST00000516612 133 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 RNU6-143P-201ENST00000516942 93 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC022968.1-201ENST00000567372 442 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 MTCO3P13-201ENST00000577757 781 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AC133104.2-201ENST00000615272 193 ntBASIC3.73□□□□□ -1.81
VSX1Q9NZR4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.73□□□□□ -1.81
VSX1Q9NZR4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms