Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC073325.2-201ENST00000339545 159 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 RNU4-1-201ENST00000363925 141 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 RNU5A-8P-201ENST00000364102 114 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 Y_RNA.359-201ENST00000365498 102 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 RNU1-39P-201ENST00000383897 165 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 Y_RNA.436-201ENST00000384097 102 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 SNORA46-201ENST00000384762 135 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 SNORA40.3-201ENST00000390964 122 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 DEFB108C-201ENST00000400154 252 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 RN7SKP123-201ENST00000410732 291 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AL645937.1-202ENST00000421799 937 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 MTND6P13-201ENST00000443510 523 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 UQCRHP3-201ENST00000451503 251 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 TPT1P7-201ENST00000458300 517 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 SNORD42A-201ENST00000459584 64 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 RPL23AP41-201ENST00000484754 458 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 SCGB1D5P-201ENST00000515134 247 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AP000857.1-201ENST00000532151 543 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC040904.1-201ENST00000590850 223 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 BNIP3P8-201ENST00000597863 560 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 SEPT7P9-203ENST00000604116 343 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC131902.3-201ENST00000611767 581 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC091304.9-201ENST00000612091 226 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC010149.2-201ENST00000637608 315 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 AC093831.2-201ENST00000624393 3427 ntBASIC2.91□□□□□ -1.94
NLGN3Q9NZ94 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NLGN3Q9NZ94 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NLGN3Q9NZ94 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 RNY4P16-201ENST00000364768 94 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 RNU6-432P-201ENST00000384196 109 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 FCF1P10-201ENST00000407590 479 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 RPS3AP3-201ENST00000411933 242 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC245054.2-201ENST00000415639 319 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL589872.1-201ENST00000426602 288 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL589823.1-201ENST00000429577 183 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 TIMM9P1-201ENST00000436122 256 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL162389.1-201ENST00000449233 177 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 SSXP1-201ENST00000453640 473 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL359385.1-201ENST00000456509 365 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 RN7SL75P-201ENST00000461926 281 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC104472.2-201ENST00000469035 601 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 MTND1P3-201ENST00000484956 952 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 ARL2BPP4-201ENST00000506854 471 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 MTCO3P7-201ENST00000510008 774 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 RNU2-46P-201ENST00000517038 113 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 SNORA31.26-201ENST00000517250 137 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AP002963.1-201ENST00000530590 184 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC005951.2-201ENST00000576282 495 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 MIR3146-201ENST00000580367 79 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 MIR4293-201ENST00000584305 78 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC245517.5-201ENST00000611529 162 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 TUG1_2.1-201ENST00000614234 87 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC008250.2-201ENST00000615261 205 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AL136313.1-201ENST00000624804 202 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.9□□□□□ -1.95
NLGN3Q9NZ94 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 DEFB108F-201ENST00000344638 222 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 U8.3-201ENST00000363321 132 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 SNORA14A-201ENST00000364773 135 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 SNORA36C-201ENST00000384289 132 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms