Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6-853P-201ENST00000364306 107 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AL445529.1-201ENST00000398713 389 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 RNU4-22P-201ENST00000411058 166 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 Z82209.1-201ENST00000422141 2135 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 BPY2DP-201ENST00000422208 265 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AP000542.1-201ENST00000448473 371 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC011753.1-201ENST00000451001 220 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 MTATP6P14-201ENST00000455189 673 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC027673.1-201ENST00000456245 405 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC013267.1-201ENST00000458227 267 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 RNU4-29P-201ENST00000515943 174 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 RNU6-927P-201ENST00000516199 100 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 RNA5SP282-201ENST00000516355 108 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 RNA5SP290-201ENST00000517133 127 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC234778.2-201ENST00000566241 354 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC060771.1-201ENST00000582031 164 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC013412.1-201ENST00000610687 192 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AC009269.6-201ENST00000621778 588 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 MIR6073-201ENST00000352083 89 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 RNA5SP508-201ENST00000411327 119 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC096649.2-201ENST00000416186 393 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 USP9YP26-201ENST00000421008 661 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC007560.1-201ENST00000426912 237 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 USP12PX-201ENST00000432383 1057 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 SNRPEP9-201ENST00000436794 238 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 RPL32P28-201ENST00000443577 397 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC020550.1-201ENST00000447385 163 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC008481.1-201ENST00000463278 396 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC034222.1-201ENST00000494052 532 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC098591.2-201ENST00000510152 315 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC009097.3-201ENST00000563557 1018 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC023813.2-201ENST00000564321 469 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC135628.1-201ENST00000568867 534 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 MYL12BP1-201ENST00000569826 507 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AL596327.1-201ENST00000603629 213 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AL136370.1-201ENST00000608166 691 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 ZNF271P-202ENST00000465539 1970 ntBASIC2.36□□□□□ -2.03
KLHL28Q9NXS3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AL356057.3-201ENST00000402607 340 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 RNU6-920P-201ENST00000410926 92 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 MTCO1P17-201ENST00000411522 491 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 OSTCP8-201ENST00000445117 448 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AC005410.1-202ENST00000460347 485 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 MRPL42P6-201ENST00000486397 371 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 RPS27AP10-201ENST00000496103 208 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 MTND5P13-201ENST00000513046 1079 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AC022447.1-201ENST00000515358 464 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 RNA5SP216-201ENST00000516111 123 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 HMGB1P41-201ENST00000520234 440 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 CKS1BP7-201ENST00000522230 235 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AL160237.3-201ENST00000604114 1013 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AL158050.2-201ENST00000605336 568 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AC116312.1-201ENST00000606841 314 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 MIR6817-201ENST00000615588 66 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AP000676.3-201ENST00000623299 569 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms