Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 RNU1-13P-201ENST00000384499 162 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 RNU4-55P-201ENST00000410731 137 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 RPL26P27-201ENST00000414397 437 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 MRPL50P2-201ENST00000416821 482 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AL365496.1-201ENST00000426885 215 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AL592045.1-201ENST00000429867 352 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 BRK1P2-201ENST00000442875 223 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AC010401.1-201ENST00000463867 348 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 RPL9P6-201ENST00000492764 598 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 SNORA31.21-201ENST00000517180 77 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AL391261.3-201ENST00000557194 520 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AC007224.1-201ENST00000564410 144 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 MIR4286-201ENST00000580651 93 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AL109618.2-201ENST00000605527 211 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 MIR6867-201ENST00000610636 67 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AC122108.2-201ENST00000611946 526 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AL161629.2-201ENST00000615347 275 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 ZYXP1-201ENST00000617638 118 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 AC099654.12-201ENST00000639868 649 ntBASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHB16Q9NRJ7 RLIMP1-201ENST00000339626 1680 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 FRG1CP-201ENST00000358464 769 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AC069157.1-201ENST00000421749 137 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 RPL21P40-201ENST00000428586 483 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 RPL36AP53-201ENST00000432891 316 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 FABP5P13-201ENST00000452144 328 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 RPL12P25-201ENST00000455592 494 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 RANP3-201ENST00000530970 276 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 TGIF1P1-201ENST00000558095 802 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AC120057.2-201ENST00000571520 271 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AP001330.5-201ENST00000607176 411 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AC011155.2-201ENST00000623202 216 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AL157786.1-207ENST00000627771 695 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 U6.114-201ENST00000636407 96 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 Z99571.1-201ENST00000636677 394 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 ZNF680P1-201ENST00000436625 1469 ntBASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB16Q9NRJ7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AL139276.1-201ENST00000311910 1001 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 RNU1-75P-201ENST00000347264 129 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 SNORA4.3-201ENST00000365564 137 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 RN7SKP263-201ENST00000411194 309 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AC092809.3-201ENST00000415453 231 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 HMGB3P20-201ENST00000417997 600 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 HSPE1P1-201ENST00000421494 318 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 HMGN2P30-201ENST00000423237 256 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 DPPA2P1-201ENST00000428060 556 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AL451074.3-201ENST00000437709 472 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 RPS15AP9-201ENST00000439856 381 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AL031183.1-201ENST00000457667 207 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AC114786.4-201ENST00000508771 728 ntBASIC3.19□□□□□ -1.9
PCDHB16Q9NRJ7 AC110768.1-201ENST00000509222 400 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms