Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX4Q9NQI0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX4Q9NQI0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX4Q9NQI0 AL022154.1-201ENST00000604698 785 ntBASIC3.52□□□□□ -1.85
DDX4Q9NQI0 AC098614.4-201ENST00000607601 462 ntBASIC3.52□□□□□ -1.85
DDX4Q9NQI0 AL591516.1-201ENST00000611326 274 ntBASIC3.52□□□□□ -1.85
DDX4Q9NQI0 AC068831.7-201ENST00000616954 363 ntBASIC3.52□□□□□ -1.85
DDX4Q9NQI0 AL360181.4-201ENST00000621752 134 ntBASIC3.52□□□□□ -1.85
DDX4Q9NQI0 AC095031.1-201ENST00000623685 672 ntBASIC3.52□□□□□ -1.85
DDX4Q9NQI0 AC019226.1-201ENST00000625666 515 ntBASIC3.52□□□□□ -1.85
DDX4Q9NQI0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX4Q9NQI0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
DDX4Q9NQI0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX4Q9NQI0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 MTND5P26-201ENST00000426018 1752 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 RNY4P16-201ENST00000364768 94 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 SNORA48.8-201ENST00000391324 134 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 RPS3AP24-201ENST00000407896 734 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 MTND3P17-201ENST00000416968 344 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 ISCA1P6-201ENST00000427740 390 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 HMGB3P8-201ENST00000449709 577 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 RPS3AP17-201ENST00000472594 777 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC135721.1-201ENST00000497954 479 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC083906.5-201ENST00000503722 328 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 KLHL2P1-201ENST00000508691 521 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 IGHV3-76-201ENST00000522465 295 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC011979.2-201ENST00000527568 352 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AL022099.1-201ENST00000604551 712 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AL391813.2-201ENST00000609113 322 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AL161734.1-201ENST00000609720 557 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC008121.2-201ENST00000614647 523 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC136475.10-201ENST00000620253 385 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC099654.12-201ENST00000639868 649 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 AC005832.2-201ENST00000538921 1430 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX4Q9NQI0 MTND4P5-201ENST00000435821 1374 ntBASIC3.51□□□□□ -1.85
DDX4Q9NQI0 PWAR6-201ENST00000552334 4618 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AL035425.3-201ENST00000564206 4996 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 Y_RNA.3-201ENST00000362331 103 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 RNU5E-1-201ENST00000362477 120 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 RNU4-1-201ENST00000363925 141 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 RNY1P12-201ENST00000364251 105 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 RNU6-1215P-201ENST00000384441 102 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 RPS3AP36-201ENST00000398190 775 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC127391.1-201ENST00000411737 98 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AL592148.1-201ENST00000413568 445 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 SSXP9-201ENST00000417503 292 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 RPS15AP12-201ENST00000419498 388 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC105272.1-201ENST00000438604 198 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 DNAJC19P4-201ENST00000440115 345 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 MTND1P1-201ENST00000445453 368 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AL162389.1-201ENST00000449233 177 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 RBM43P1-201ENST00000476891 1081 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC010493.1-201ENST00000513479 292 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 DEFB131E-202ENST00000602581 683 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AL133173.2-201ENST00000614270 90 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AL450472.3-201ENST00000615578 367 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX4Q9NQI0 AP003122.5-201ENST00000527668 3766 ntBASIC3.5□□□□□ -1.85
DDX4Q9NQI0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 RNU1-75P-201ENST00000347264 129 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 Y_RNA.296-201ENST00000364930 108 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms