Protein–RNA interactions for Protein: Q9NP55

BPIFA1, BPI fold-containing family A member 1, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA1Q9NP55 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 Y_RNA.372-201ENST00000365599 102 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 Y_RNA.554-201ENST00000384672 102 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 Z98941.1-201ENST00000407764 100 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 RNU2-9P-201ENST00000410194 145 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AL356867.1-201ENST00000429623 299 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC092473.1-201ENST00000441098 221 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 CBWD4P-201ENST00000445695 655 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 CEACAMP4-201ENST00000457676 421 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC013267.1-201ENST00000458227 267 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC117522.1-201ENST00000509821 380 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC009646.1-201ENST00000510455 318 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 ARL2BPP6-201ENST00000512757 439 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 MTND1P5-201ENST00000517906 940 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC011602.1-201ENST00000546484 331 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AL359212.1-201ENST00000556608 614 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC126118.1-201ENST00000607744 628 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC012531.5-201ENST00000611375 151 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 uc_338.1-201ENST00000612113 180 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 SEPT14P19-203ENST00000633205 211 ntBASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
BPIFA1Q9NP55 TNPO1P3-201ENST00000436471 2662 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 ZNF680P1-201ENST00000436625 1469 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 OR4G2P-201ENST00000328113 903 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 RNU6-1120P-201ENST00000362988 108 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 Y_RNA.381-201ENST00000365666 102 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 SNORA24.1-201ENST00000384401 135 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 RNVU1-14-201ENST00000384770 164 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 RNU6-1197P-201ENST00000391183 107 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AL138878.1-201ENST00000405131 347 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AL591034.1-201ENST00000407447 340 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 MIR548F1-201ENST00000408667 84 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 FCF1P9-201ENST00000412546 282 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AL451062.2-201ENST00000427515 271 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC093899.1-201ENST00000457984 376 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 RPL23AP62-201ENST00000463396 453 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC004801.2-202ENST00000463559 283 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 RPL7P5-201ENST00000471472 736 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 RPS20P22-201ENST00000473700 357 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC116562.3-201ENST00000506136 177 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 RN7SKP60-201ENST00000516985 239 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 CASP1P1-201ENST00000526345 212 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC068587.5-201ENST00000528506 175 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC002545.1-201ENST00000592511 181 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC103710.3-201ENST00000608157 948 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC084757.4-201ENST00000616350 526 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC007998.5-201ENST00000622938 237 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 AC139792.3-201ENST00000623525 224 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 Z83843.1-201ENST00000604070 3685 ntBASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BPIFA1Q9NP55 ZNF807-201ENST00000328088 1707 ntBASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 MIR181A1-201ENST00000385026 110 ntBASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 DPPA2P1-201ENST00000428060 556 ntBASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 AC005300.1-201ENST00000428401 373 ntBASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 BX679664.1-201ENST00000434429 253 ntBASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 RPL36AP6-201ENST00000435770 321 ntBASIC3.28□□□□□ -1.88
BPIFA1Q9NP55 HMGB3P11-201ENST00000440127 604 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms