Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC009161.2-201ENST00000624626 138 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 U6.114-201ENST00000636407 96 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 MTND5P42-201ENST00000637720 498 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC093908.1-201ENST00000623125 8092 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 MAPK10-322ENST00000641485 4530 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 Y_RNA.22-201ENST00000362492 102 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 RNU6-512P-201ENST00000364438 103 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 MIR1-2-201ENST00000384961 85 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC080125.1-201ENST00000414888 684 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 MRPL50P2-201ENST00000416821 482 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 HSPE1P1-201ENST00000421494 318 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AL445584.1-201ENST00000431451 330 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 MTND1P1-201ENST00000445453 368 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 DDX3P2-201ENST00000446138 111 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC008264.1-201ENST00000447612 367 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AL031183.1-201ENST00000457667 207 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 snoU13.28-201ENST00000459235 104 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC034236.1-201ENST00000469891 373 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC126389.1-201ENST00000477436 290 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 RPL39P36-201ENST00000490784 156 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC108078.2-201ENST00000510750 236 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC091133.4-201ENST00000511142 308 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 MTND4LP31-201ENST00000514859 294 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 FAM92A1P1-201ENST00000528023 890 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 AL022154.1-201ENST00000604698 785 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 SNORA50A-202ENST00000629536 136 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.3□□□□□ -1.88
BRF2Q9HAW0 MIR6863-201ENST00000636112 90 ntBASIC3.3□□□□□ -1.88
BRF2Q9HAW0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 Y_RNA.1-201ENST00000352915 104 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 Y_RNA.367-201ENST00000365544 101 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AL359837.1-201ENST00000381357 287 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 SNORA5A-201ENST00000384111 134 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AL139397.2-201ENST00000404529 772 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 RNU2-9P-201ENST00000410194 145 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 RNU6-387P-201ENST00000411331 105 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AC114491.1-201ENST00000416095 246 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AC099548.1-201ENST00000421443 426 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 ISCA1P1-201ENST00000426679 387 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AL591212.2-201ENST00000433923 257 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 SNRPEP9-201ENST00000436794 238 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 RBMY2UP-201ENST00000453474 324 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 RPL21P8-201ENST00000465083 535 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 RNU6-720P-201ENST00000516363 108 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 RNA5SP471-201ENST00000516971 106 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 SNORA31.21-201ENST00000517180 77 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AP001646.1-201ENST00000527936 915 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 BNIP3P9-201ENST00000603714 553 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AL161629.2-201ENST00000615347 275 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AL359740.1-201ENST00000624340 592 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AC099654.12-201ENST00000639868 649 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 MTND5P7-201ENST00000413558 1798 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 ZNF285B-201ENST00000561698 1767 ntBASIC3.29□□□□□ -1.88
BRF2Q9HAW0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.29□□□□□ -1.88
BRF2Q9HAW0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms