Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MTATP6P4-201ENST00000427725 675 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RPL23AP89-201ENST00000439324 255 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 MTND1P17-201ENST00000448961 204 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RPS26P3-201ENST00000470205 348 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC090543.2-201ENST00000483963 348 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC004057.1-201ENST00000485827 348 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RPL21P129-201ENST00000491732 478 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RNU6-677P-201ENST00000516914 101 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RN7SKP60-201ENST00000516985 239 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RN7SKP258-201ENST00000517151 304 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC106782.4-201ENST00000568264 210 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC067852.3-201ENST00000589177 561 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 CYP2C61P-201ENST00000604072 290 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 ATP1B3P1-201ENST00000605365 821 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 MIR6867-201ENST00000610636 67 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AL359547.2-201ENST00000615810 418 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 uc_338.22-201ENST00000622722 187 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC009812.4-201ENST00000569134 1805 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 SNORA60-201ENST00000362396 134 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RNA5SP130-201ENST00000364431 114 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 SNORD116-11-201ENST00000383882 92 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RNU6-629P-201ENST00000384061 103 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 SNORD70.1-201ENST00000391007 85 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RNA5SP111-201ENST00000411386 101 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 MTCO1P39-201ENST00000426148 480 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 MTND3P2-201ENST00000438452 342 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RPL26P6-201ENST00000440913 438 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RPL30P15-201ENST00000457129 321 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 Y_RNA.653-201ENST00000459091 95 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RNU6-953P-201ENST00000459154 107 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC091153.1-201ENST00000466297 402 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 DYNLL1P5-201ENST00000467158 270 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 MLLT10P2-201ENST00000506434 249 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 TBCAP3-201ENST00000512475 312 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RNA5SP360-201ENST00000516555 118 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 DYNLL1P4-201ENST00000549314 266 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC063950.1-201ENST00000552036 308 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 SNRPGP18-201ENST00000553000 214 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC034105.4-201ENST00000568304 277 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 MIR3671-201ENST00000580455 88 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 MIR5690-201ENST00000583739 73 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 BDH2P1-201ENST00000602288 736 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC136443.5-201ENST00000603741 370 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC007619.2-201ENST00000605743 379 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC009570.1-201ENST00000609599 745 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 AC034229.5-201ENST00000624258 185 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 MTND5P42-201ENST00000637720 498 ntBASIC3.94□□□□□ -1.78
NDC1Q9BTX1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDC1Q9BTX1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NDC1Q9BTX1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NDC1Q9BTX1 MIR372-201ENST00000362225 67 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 RN7SKP280-201ENST00000364196 304 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 RNU6-335P-201ENST00000364563 113 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 RNU6-639P-201ENST00000384074 107 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 Y_RNA.459-201ENST00000384251 102 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 Y_RNA.482-201ENST00000384377 111 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NDC1Q9BTX1 SNORA16.2-201ENST00000390991 127 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 MIR450B-201ENST00000401182 78 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 AL139397.2-201ENST00000404529 772 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 RPL21P65-201ENST00000406094 466 ntBASIC3.93□□□□□ -1.78
NDC1Q9BTX1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.93□□□□□ -1.78
NDC1Q9BTX1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms