Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC005668.1-201ENST00000571142 476 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 MIR3171-201ENST00000584270 74 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AP001029.3-201ENST00000588063 596 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC008638.3-201ENST00000603341 463 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC104763.2-201ENST00000604179 382 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AL121992.2-201ENST00000606262 256 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AL133215.3-201ENST00000609801 448 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC004696.1-201ENST00000614345 607 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AL589994.2-201ENST00000621124 579 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC134503.1-201ENST00000633048 54 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 RIOK3P1-201ENST00000418778 1528 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 ZNF826P-207ENST00000622273 1910 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 NACAP2-201ENST00000318548 624 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 SNORA60-201ENST00000362396 134 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 RNU6-701P-201ENST00000384059 107 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 MIR514A1-201ENST00000385133 98 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 SRIP2-201ENST00000428470 166 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC236972.2-201ENST00000434979 310 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 TXNP1-201ENST00000441872 371 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 NEFMP1-201ENST00000443423 1006 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 CACYBPP2-201ENST00000453625 678 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 RPL37P6-201ENST00000460682 294 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 GMFBP1-201ENST00000467831 427 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC233702.1-201ENST00000482905 502 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.691-201ENST00000516611 103 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 SCOCP1-201ENST00000554676 349 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC022968.1-201ENST00000567372 442 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 MIR3690-201ENST00000580266 75 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 MIR4742-201ENST00000581069 85 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC021646.1-201ENST00000605469 484 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AL355802.3-201ENST00000607571 545 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AP001486.3-201ENST00000615334 372 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC010205.1-201ENST00000616668 449 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AC079684.1-201ENST00000621405 437 ntBASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRFN3Q9BTN0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.216-201ENST00000364205 93 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 RNA5SP97-201ENST00000365006 84 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.384-201ENST00000383909 102 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 RNU6-817P-201ENST00000391083 104 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AL136116.1-201ENST00000403591 381 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AL591416.1-201ENST00000404015 867 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 MIR548P-201ENST00000408336 84 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 RNA5SP129-201ENST00000410276 118 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AL451054.2-201ENST00000420896 202 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC005326.1-201ENST00000429197 123 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 SNORD19B-201ENST00000459623 84 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 MRPS17P3-201ENST00000465453 385 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC006512.1-201ENST00000468816 291 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC078785.3-201ENST00000476607 425 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 RN7SL271P-201ENST00000487601 295 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 EIF4EP3-201ENST00000498782 656 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC006504.6-201ENST00000590142 199 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC093913.1-201ENST00000614178 329 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AL158196.1-201ENST00000616786 434 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AL354950.2-201ENST00000617939 290 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms