Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC138623.1-201ENST00000418060 216 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 EBAG9P1-201ENST00000418955 543 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 AL358075.3-201ENST00000426289 226 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 AC093840.1-201ENST00000511599 336 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 AL671862.1-201ENST00000515851 349 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 Y_RNA.667-201ENST00000516212 107 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 RNU4-60P-201ENST00000517239 135 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 DEFB131C-201ENST00000528817 165 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 AP002001.1-203ENST00000534002 267 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 AC090616.3-201ENST00000582184 217 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 AC010632.3-201ENST00000611377 369 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 AC024581.2-201ENST00000619986 252 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USB1Q9BQ65 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USB1Q9BQ65 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USB1Q9BQ65 RNU6-834P-201ENST00000362367 110 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 RNA5SP375-201ENST00000362975 119 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 Y_RNA.101-201ENST00000363154 102 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 RN7SKP69-201ENST00000365390 305 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 RNA5SP235-201ENST00000365411 114 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 U3.19-201ENST00000390893 196 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 RNU6-1248P-201ENST00000391096 64 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 RPL23AP95-201ENST00000426806 265 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USB1Q9BQ65 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 UBE2CP3-201ENST00000502715 450 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 RNA5SP438-201ENST00000516561 112 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 ZNF192P1-203ENST00000565888 810 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 MIR4260-201ENST00000583107 67 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 AL356157.2-201ENST00000605122 111 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 AC126915.2-201ENST00000610957 190 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 AC010999.1-201ENST00000611856 324 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USB1Q9BQ65 SMG1P6-201ENST00000532337 2930 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 AL731532.1-201ENST00000623972 4236 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USB1Q9BQ65 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 SAMMSON-226ENST00000642089 1582 ntBASIC5.24□□□□□ -1.57
USB1Q9BQ65 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USB1Q9BQ65 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USB1Q9BQ65 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
USB1Q9BQ65 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USB1Q9BQ65 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
USB1Q9BQ65 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USB1Q9BQ65 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USB1Q9BQ65 SELENOWP1-201ENST00000322792 252 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 RNA5SP273-201ENST00000362484 113 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 RNA5SP510-201ENST00000364697 99 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 RNA5SP284-201ENST00000384547 118 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 AL121835.1-201ENST00000404250 354 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 RPL27AP8-201ENST00000424277 446 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 RPS29P14-201ENST00000431518 171 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 AL451050.1-201ENST00000450126 415 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 RNU6-625P-201ENST00000459412 107 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 DUTP1-201ENST00000493631 470 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 AC108145.1-201ENST00000503770 153 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 GLUD1P3-202ENST00000508551 200 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 MIR4431-201ENST00000579990 94 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 AC090132.2-201ENST00000615881 347 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 MIR4302-201ENST00000638058 60 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 AC018529.3-201ENST00000624212 2254 ntBASIC5.23□□□□□ -1.57
USB1Q9BQ65 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
USB1Q9BQ65 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USB1Q9BQ65 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USB1Q9BQ65 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
USB1Q9BQ65 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
USB1Q9BQ65 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
USB1Q9BQ65 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms