Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL21A1Q96P44 Y_RNA.548-201ENST00000384656 105 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL21A1Q96P44 RN7SKP140-201ENST00000411196 284 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 AL451054.2-201ENST00000420896 202 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC013410.2-201ENST00000422627 201 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC003685.2-201ENST00000422795 395 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC009414.1-201ENST00000427200 443 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 OR10R1P-201ENST00000441524 1141 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 WASF1P1-201ENST00000447560 1131 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AL031313.1-201ENST00000448435 256 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 LINC00888-204ENST00000487386 421 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AL160314.1-201ENST00000490836 438 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC008716.1-201ENST00000511084 513 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 SNORA31.18-201ENST00000517043 134 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC021269.2-201ENST00000532318 330 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC007115.1-201ENST00000546853 234 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC103810.1-201ENST00000579873 453 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC069431.2-201ENST00000604149 1099 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.21□□□□□ -2.06
COL21A1Q96P44 FTX_3.1-201ENST00000610451 147 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC008498.1-201ENST00000613012 531 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 TUG1_2.1-201ENST00000614234 87 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AC010133.1-201ENST00000615809 842 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 AL449363.1-201ENST00000617815 186 ntBASIC2.21□□□□□ -2.06
COL21A1Q96P44 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL21A1Q96P44 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 SNORA70B-201ENST00000384210 135 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 RNU6-140P-201ENST00000384566 108 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 USP9YP33-201ENST00000412220 421 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC009963.1-201ENST00000417265 157 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 USP9YP13-201ENST00000417797 480 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC083875.1-201ENST00000419509 405 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 BX119904.4-201ENST00000424402 301 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 NANOGP5-201ENST00000424456 877 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 USP9YP35-201ENST00000435696 412 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 RPL7P36-201ENST00000444633 681 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 RN7SL636P-201ENST00000497504 294 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC026436.1-201ENST00000510537 270 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 Y_RNA.673-201ENST00000516306 88 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 EEF1A1P37-201ENST00000522748 715 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 AL355877.2-201ENST00000603670 358 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 MIR6895-201ENST00000613497 78 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC034102.8-201ENST00000615146 484 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC009159.1-201ENST00000618386 642 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.2□□□□□ -2.06
COL21A1Q96P44 AL391262.2-201ENST00000622466 494 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 PCMTD1P7-201ENST00000634506 357 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 ZNF720P1-201ENST00000562403 1939 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 AC135776.4-201ENST00000624300 1904 ntBASIC2.2□□□□□ -2.06
COL21A1Q96P44 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL21A1Q96P44 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL21A1Q96P44 RNU6-462P-201ENST00000362659 105 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 RN7SKP266-201ENST00000410232 287 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC096649.2-201ENST00000416186 393 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 MTND1P23-201ENST00000416931 372 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 USP12PX-201ENST00000432383 1057 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 HSFY7P-201ENST00000432672 318 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 ATP5F1P1-201ENST00000433775 569 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 HSFY8P-201ENST00000437934 318 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 HSFY5P-201ENST00000453726 309 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 snoU13.26-201ENST00000459452 105 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC026801.1-201ENST00000497178 464 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 SCARNA11.3-201ENST00000517276 130 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC109329.2-201ENST00000519658 482 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms