Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC42Q96M95 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC42Q96M95 AL109755.1-201ENST00000401791 649 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 RN7SKP158-201ENST00000410453 326 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 RNU2-28P-201ENST00000410457 189 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 AL592310.1-201ENST00000414330 671 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 RPL7P54-201ENST00000438336 674 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 GTF2IP12-201ENST00000456547 356 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 BZW1P2-201ENST00000473537 826 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC42Q96M95 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC124283.4-201ENST00000581815 456 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 AL355297.2-201ENST00000604792 129 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC069294.1-201ENST00000608397 350 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC016911.1-201ENST00000613297 452 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC020658.4-201ENST00000613987 684 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC004009.2-201ENST00000623016 728 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 AC010889.1-201ENST00000566193 2666 ntBASIC1.8□□□□□ -2.12
CCDC42Q96M95 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
CCDC42Q96M95 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC42Q96M95 RSL24D1P4-201ENST00000400938 484 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 AL133264.1-201ENST00000407157 562 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 XKRYP1-201ENST00000423438 492 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 AC007742.1-201ENST00000425789 329 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 MED14P1-201ENST00000430517 648 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 MTND2P5-201ENST00000432656 1006 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 XKRYP2-201ENST00000432915 492 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 ELOCP26-201ENST00000436067 329 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC42Q96M95 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 AC013828.1-201ENST00000481845 158 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 RPL21P47-201ENST00000483696 477 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 RNA5SP291-201ENST00000517222 105 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC42Q96M95 AP001429.1-201ENST00000602568 530 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC42Q96M95 AC103710.2-201ENST00000609912 942 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 AC116618.1-201ENST00000634617 774 ntBASIC1.79□□□□□ -2.12
CCDC42Q96M95 RNU6-884P-201ENST00000363889 107 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC42Q96M95 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AL512604.1-201ENST00000404812 257 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 BOLA3P4-201ENST00000418151 400 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 AIMP1P2-201ENST00000425294 312 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC234064.1-201ENST00000436312 247 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC093155.1-201ENST00000440164 826 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 RNFT1P2-201ENST00000443064 757 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 MTCO1P42-201ENST00000457379 726 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC098799.1-201ENST00000504752 800 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 LTV1P1-201ENST00000510683 1237 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC010486.1-201ENST00000511793 424 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 AL359212.1-201ENST00000556608 614 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC004853.1-201ENST00000604902 698 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC068944.2-201ENST00000610373 403 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 U4atac.1-201ENST00000618345 95 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 MIR6852-201ENST00000621699 66 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 U6.101-201ENST00000637707 76 ntBASIC1.78□□□□□ -2.12
CCDC42Q96M95 ADAM3A-203ENST00000461344 2157 ntBASIC1.78□□□□□ -2.13
CCDC42Q96M95 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CCDC42Q96M95 RNU2-33P-201ENST00000410344 192 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 SFR1P2-201ENST00000421841 730 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC246680.2-201ENST00000422106 389 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 BPY2DP-201ENST00000422208 265 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 RPS3AP44-201ENST00000425466 790 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC008850.1-201ENST00000427546 362 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC108729.2-201ENST00000476543 840 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC092436.1-201ENST00000506450 503 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC084851.1-201ENST00000529105 249 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC067805.1-201ENST00000559344 470 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC007151.1-201ENST00000572774 483 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AL391813.1-201ENST00000603098 260 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms