Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RN7SKP158-201ENST00000410453 326 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RNU6-712P-201ENST00000410558 100 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 HSPE1P12-201ENST00000412576 301 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RPL23AP26-201ENST00000412728 464 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 MTCO2P27-201ENST00000420740 428 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AC090774.1-201ENST00000435925 246 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 Y_RNA.635-201ENST00000459041 101 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RPL21P8-201ENST00000465083 535 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AC027575.1-201ENST00000481064 460 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RPL29P14-201ENST00000495837 428 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RNA5SP208-201ENST00000516156 78 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RNU6-566P-201ENST00000516790 107 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AC103705.1-201ENST00000619013 241 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC093908.1-201ENST00000623125 8092 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 ASNSP1-201ENST00000518311 1939 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 XIAPP3-201ENST00000312918 795 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RNU6-1252P-201ENST00000363054 104 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RN7SKP44-201ENST00000363602 316 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 Y_RNA.212-201ENST00000364177 102 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 Y_RNA.216-201ENST00000364205 93 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RNU6-701P-201ENST00000384059 107 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 MIR153-1-201ENST00000384914 90 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 MIR449B-201ENST00000384995 97 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 MIR559-201ENST00000385188 96 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RNY4P36-201ENST00000391116 96 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 HMGN2P8-201ENST00000391458 268 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RPL5P18-201ENST00000406671 891 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 Z82205.1-201ENST00000428456 297 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RPL23AP46-201ENST00000438548 490 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RANP8-201ENST00000444720 713 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 FGF7P3-201ENST00000454645 303 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC146944.2-203ENST00000502493 354 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC139495.1-202ENST00000513164 354 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 RNU6-1170P-201ENST00000515974 106 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 MIR2114-201ENST00000516645 80 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 SRGNP1-201ENST00000603392 451 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC092747.3-201ENST00000603769 301 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AP001330.4-201ENST00000604350 154 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AL080274.1-201ENST00000605565 220 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 BRDTP1-201ENST00000605735 677 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC084781.2-201ENST00000615568 161 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 AC112484.5-201ENST00000624189 228 ntBASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHAMP1Q96JM3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 AC093535.2-201ENST00000624769 2326 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 RNU6-14P-201ENST00000384630 106 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 MIR606-201ENST00000384851 96 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 SSXP9-201ENST00000417503 292 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 AC099677.1-201ENST00000420575 175 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 PPP1R11P2-201ENST00000423543 382 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 CYCSP43-201ENST00000438233 310 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 IFNWP4-201ENST00000453148 294 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 AC106872.2-201ENST00000494303 480 ntBASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHAMP1Q96JM3 AC026801.2-201ENST00000515352 425 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms