Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.75□□□□□ -2.29
SPG11Q96JI7 IGLVI-20-201ENST00000519296 130 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 CASP1P1-201ENST00000526345 212 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 AC010620.1-201ENST00000601088 1102 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 AC004943.3-201ENST00000624116 600 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.75□□□□□ -2.29
SPG11Q96JI7 RNU6-48P-201ENST00000384161 107 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 SNORA51.10-201ENST00000384418 136 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 PTGES3P2-201ENST00000407942 482 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 RNA5SP498-201ENST00000411342 120 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.75□□□□□ -2.29
SPG11Q96JI7 RPL37P6-202ENST00000464216 403 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.75□□□□□ -2.29
SPG11Q96JI7 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 AC108676.2-201ENST00000605225 163 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 RNA5SP347-201ENST00000362445 119 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 RNU6-799P-201ENST00000363567 107 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 SNORA62.1-201ENST00000364287 154 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 AL139397.2-201ENST00000404529 772 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 MTCO1P3-201ENST00000429327 192 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 RNU2-44P-201ENST00000516795 194 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC011468.4-201ENST00000603942 409 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC091304.6-201ENST00000619761 202 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 AL356776.1-201ENST00000406574 447 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 MTND5P25-201ENST00000430499 799 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 GPM6BP3-201ENST00000442797 145 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 RPS27P1-201ENST00000450552 247 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 DEFB108E-201ENST00000524692 240 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 EIF4A1P12-201ENST00000551910 141 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC090953.1-201ENST00000604305 1092 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.74□□□□□ -2.29
SPG11Q96JI7 AC024595.1-201ENST00000623088 387 ntBASIC0.74□□□□□ -2.29
SPG11Q96JI7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SPG11Q96JI7 AL159152.1-201ENST00000635019 2587 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 RPS20P20-201ENST00000460498 340 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 AL121769.1-201ENST00000469473 401 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 YWHAQP7-201ENST00000603536 658 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 AC113368.1-201ENST00000603736 382 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 FAM71BP1-201ENST00000604431 523 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 Y_RNA.644-201ENST00000459006 113 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 AC104692.1-201ENST00000472406 90 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 AC023141.11-201ENST00000508864 202 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 CDC42P4-201ENST00000510507 563 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.73□□□□□ -2.29
SPG11Q96JI7 RPS15AP11-201ENST00000594193 385 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 AC068620.3-201ENST00000602749 560 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 AL118508.4-201ENST00000624142 1176 ntBASIC0.73□□□□□ -2.29
SPG11Q96JI7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SPG11Q96JI7 AP000776.1-201ENST00000530032 1663 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 MTND4P34-201ENST00000572715 1371 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 RNA5SP189-201ENST00000364920 115 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 Y_RNA.559-201ENST00000384686 107 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 MIR518A2-201ENST00000384966 87 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 AL606489.2-201ENST00000433886 234 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 HMGB1P24-202ENST00000615653 685 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 CFTRP2-201ENST00000634304 199 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SPG11Q96JI7 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 U8.3-201ENST00000363321 132 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 PRELID3BP11-201ENST00000414230 479 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 MTND4LP13-201ENST00000425022 298 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 ZNF33CP-201ENST00000432492 2030 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 RNU1-104P-201ENST00000517280 175 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 HMGB1P46-201ENST00000520062 610 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 AP004247.1-201ENST00000531556 1289 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 MIR4458-201ENST00000578872 75 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 AP001180.3-201ENST00000582221 145 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 DUXAP4-201ENST00000603046 613 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 AC245884.12-201ENST00000615364 59 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.72□□□□□ -2.29
SPG11Q96JI7 AC097655.1-201ENST00000635075 318 ntBASIC0.72□□□□□ -2.29
SPG11Q96JI7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms