Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 EIF4HP2-201ENST00000424380 563 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 AC012308.1-201ENST00000451232 178 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 RNA5SP57-201ENST00000459463 123 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 AC009163.5-201ENST00000575421 637 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 MIR4662B-201ENST00000579498 81 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 AC090897.2-201ENST00000581715 130 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 MIR5006-201ENST00000583027 110 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 AC011921.2-201ENST00000589465 152 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 U7.3-201ENST00000616123 62 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 5S_rRNA.13-201ENST00000622298 123 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 AC018692.3-201ENST00000623929 123 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 AC010401.2-201ENST00000575137 4934 ntBASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MS4A3Q96HJ5 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 AC092070.2-203ENST00000598377 3644 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 RNA5SP308-201ENST00000362532 115 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 RNA5SP321-201ENST00000362722 111 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 Y_RNA.426-201ENST00000384068 113 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 SNORD116-22-201ENST00000384430 92 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 EI24P2-201ENST00000397776 1076 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 RNU4-34P-201ENST00000410431 124 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 Y_RNA.601-201ENST00000410500 113 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 RNA5SP155-201ENST00000411154 129 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 AL645939.1-201ENST00000453429 797 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 COX6B1P5-201ENST00000509843 249 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 AC100827.5-201ENST00000615883 426 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 AL162726.3-218ENST00000636401 95 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 AC024651.2-201ENST00000562480 2098 ntBASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.81□□□□□ -1.48
MS4A3Q96HJ5 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AL022323.4-201ENST00000623980 13120 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AC009779.8-201ENST00000641684 4384 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 RNU1-5P-201ENST00000362684 144 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 Y_RNA.66-201ENST00000362862 102 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 RNU6-1292P-201ENST00000383856 107 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 RNU6-418P-201ENST00000384035 107 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 U8.12-201ENST00000384701 133 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 RNU6-402P-201ENST00000410678 103 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AC027124.2-201ENST00000428249 105 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 RPL39P25-201ENST00000449384 154 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AL390198.2-201ENST00000510553 222 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AC097462.1-201ENST00000514125 324 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AP001781.1-201ENST00000530977 207 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 MIR3129-201ENST00000581095 76 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 RPL29P33-201ENST00000587474 316 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AC091133.5-201ENST00000603088 301 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AL138693.1-201ENST00000622219 129 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 U2.21-201ENST00000637295 81 ntBASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.8□□□□□ -1.48
MS4A3Q96HJ5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms