Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 YWHAEP7-203ENST00000622054 312 ntBASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 AC025034.2-201ENST00000623264 286 ntBASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 ZNF807-201ENST00000328088 1707 ntBASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM43Q96BQ3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 SNORA80A-201ENST00000363922 136 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 RNU6-996P-201ENST00000365438 107 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 SMIM11P1-201ENST00000369586 178 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 RNU6-946P-201ENST00000383878 107 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 RNU2-71P-201ENST00000411395 189 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 ZNF90P2-204ENST00000419323 1075 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 COTL1P1-201ENST00000422309 375 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 NEFMP1-201ENST00000443423 1006 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 MTND1P18-201ENST00000448191 573 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 RPS29P15-201ENST00000458329 171 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC233702.1-201ENST00000482905 502 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC116353.2-201ENST00000505332 712 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC108078.2-201ENST00000510750 236 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 RNA5SP503-201ENST00000517047 117 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 IGKV2-26-201ENST00000518305 343 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AP006587.4-201ENST00000526053 529 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 CYP4A43P-201ENST00000568156 121 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC008752.3-201ENST00000588113 712 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC006023.2-201ENST00000609916 167 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC130324.3-201ENST00000614165 542 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC007998.5-201ENST00000622938 237 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 AC048347.1-201ENST00000624621 427 ntBASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM43Q96BQ3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM43Q96BQ3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM43Q96BQ3 AC004944.1-201ENST00000517807 3059 ntBASIC3.9□□□□□ -1.78
TRIM43Q96BQ3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM43Q96BQ3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.9□□□□□ -1.78
TRIM43Q96BQ3 OR4G2P-202ENST00000641004 1759 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 RNA5SP52-201ENST00000362448 134 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 SNORA24.1-201ENST00000384401 135 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 MIR514A1-201ENST00000385133 98 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 RNU6-908P-201ENST00000410160 94 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 RN7SKP140-201ENST00000411196 284 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AC114491.1-201ENST00000416095 246 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 RPL27AP8-201ENST00000424277 446 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 HMGB1P27-201ENST00000431429 603 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 GTF2IP20-201ENST00000431663 360 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AL353572.1-201ENST00000442490 417 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 Z75741.1-201ENST00000446793 314 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 MTND4P18-201ENST00000447010 465 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 CEACAMP4-201ENST00000457676 421 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AL163973.1-201ENST00000484753 577 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AC025445.1-201ENST00000502728 300 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 RNU6-835P-201ENST00000516974 104 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 RN7SKP258-201ENST00000517151 304 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 MIR4644-201ENST00000579929 84 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 DPPA3P3-201ENST00000603842 430 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 AC116096.1-201ENST00000566804 2314 ntBASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM43Q96BQ3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 RNU6-50P-201ENST00000362356 103 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 Y_RNA.38-201ENST00000362617 102 ntBASIC3.89□□□□□ -1.79
TRIM43Q96BQ3 Y_RNA.255-201ENST00000364581 97 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms