Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 RNU4-53P-201ENST00000410828 140 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC107081.1-201ENST00000414975 361 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 MTCYBP38-201ENST00000417160 1123 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 AL031313.1-201ENST00000448435 256 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 RPL21P134-201ENST00000453468 483 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC021146.8-201ENST00000507455 733 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 AP002748.2-201ENST00000528671 348 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC124947.2-202ENST00000552735 133 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC087465.1-201ENST00000560574 245 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC009063.1-201ENST00000563342 702 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC135628.1-201ENST00000568867 534 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC046143.2-201ENST00000609789 160 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC008443.7-201ENST00000622195 246 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPNE4Q96A23 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CPNE4Q96A23 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
CPNE4Q96A23 MTND4P27-201ENST00000450813 1354 ntBASIC2.09□□□□□ -2.08
CPNE4Q96A23 AC092447.10-201ENST00000620607 1652 ntBASIC2.09□□□□□ -2.08
CPNE4Q96A23 ELF2P3-201ENST00000445099 1506 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CPNE4Q96A23 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CPNE4Q96A23 Y_RNA.192-201ENST00000363977 102 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 MIR620-201ENST00000385232 95 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AL135786.1-201ENST00000415892 214 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC018630.2-202ENST00000422992 927 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 MTND1P31-201ENST00000449206 961 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 RPL30P9-201ENST00000465586 330 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC104563.1-201ENST00000476147 376 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC021382.1-201ENST00000483523 359 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC112673.1-201ENST00000513168 575 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 RNU6-150P-201ENST00000516237 95 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 SCARNA11.3-201ENST00000517276 130 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC022634.1-201ENST00000520765 532 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 MTND3P19-201ENST00000603825 345 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC131235.4-201ENST00000609288 620 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC245297.2-201ENST00000610119 565 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AL603758.1-201ENST00000618654 241 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AL590808.1-201ENST00000618696 141 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 AL159972.1-201ENST00000625150 448 ntBASIC2.08□□□□□ -2.08
CPNE4Q96A23 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
CPNE4Q96A23 AC080128.1-201ENST00000474389 1917 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CPNE4Q96A23 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CPNE4Q96A23 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CPNE4Q96A23 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CPNE4Q96A23 RNA5SP289-201ENST00000362332 137 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 RNU6-97P-201ENST00000363387 104 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 RNU6-1078P-201ENST00000364522 103 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 SNORD116.1-201ENST00000365628 92 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 RNU1-73P-201ENST00000383971 164 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 RNU6-1207P-201ENST00000384343 107 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 SNORD23.1-201ENST00000408212 104 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CPNE4Q96A23 NPM1P11-201ENST00000417106 855 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 AL035407.1-201ENST00000429211 571 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 ZYG11AP1-201ENST00000430329 837 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.07□□□□□ -2.08
CPNE4Q96A23 AL049734.2-201ENST00000441066 616 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 EXOSC3P1-201ENST00000448649 500 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.07□□□□□ -2.08
CPNE4Q96A23 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.07□□□□□ -2.08
CPNE4Q96A23 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.07□□□□□ -2.08
CPNE4Q96A23 AL049874.1-201ENST00000489560 388 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 AC134050.1-201ENST00000495088 933 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 AC138853.1-201ENST00000503549 823 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 AC114786.4-201ENST00000508771 728 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 AC024589.1-201ENST00000512207 263 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 RPL23AP94-201ENST00000512518 302 ntBASIC2.07□□□□□ -2.08
CPNE4Q96A23 AC114797.1-201ENST00000514003 728 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms