Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPL7AP73-201ENST00000413490 353 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AC005534.2-201ENST00000431047 433 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC4Q92889 PRPS1P1-201ENST00000445305 876 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AC020550.1-201ENST00000447385 163 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AL500522.2-201ENST00000448562 343 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 HMGB3P30-201ENST00000457863 606 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 RN7SL93P-201ENST00000463035 293 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AC103987.1-201ENST00000473394 348 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.39□□□□□ -1.71
ERCC4Q92889 RN7SL271P-201ENST00000487601 295 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 TRBV12-2-201ENST00000489763 344 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AL132838.2-201ENST00000492041 314 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC4Q92889 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AC104806.1-201ENST00000508720 308 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.39□□□□□ -1.71
ERCC4Q92889 RNA5SP208-201ENST00000516156 78 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 RNU6-864P-201ENST00000516256 108 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AC087369.1-201ENST00000520775 996 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 MRPL49P2-201ENST00000521066 465 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AC090877.1-201ENST00000561418 344 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AL133255.1-201ENST00000606374 441 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC4Q92889 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC4Q92889 AL353748.2-201ENST00000622148 471 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.39□□□□□ -1.71
ERCC4Q92889 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC4Q92889 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC4Q92889 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC4Q92889 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC4Q92889 TPTE2P4-201ENST00000258589 1605 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ERCC4Q92889 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ERCC4Q92889 AC073073.2-201ENST00000609827 2578 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC4Q92889 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC4Q92889 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
ERCC4Q92889 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC4Q92889 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC4Q92889 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC4Q92889 RNU6-946P-201ENST00000383878 107 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 Y_RNA.414-201ENST00000384011 101 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 SNORA70C-201ENST00000384538 135 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 RNU6-550P-201ENST00000391057 101 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 HMGN2P8-201ENST00000391458 268 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 AC110754.1-201ENST00000399740 601 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC4Q92889 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.38□□□□□ -1.71
ERCC4Q92889 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC4Q92889 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC4Q92889 HMGN2P21-201ENST00000447764 270 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC4Q92889 PPP1R2P5-201ENST00000457256 603 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 Y_RNA.632-201ENST00000459189 102 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC4Q92889 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC4Q92889 SNORA31.9-201ENST00000516429 84 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 YPEL5P3-201ENST00000547227 352 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.38□□□□□ -1.71
ERCC4Q92889 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.38□□□□□ -1.71
ERCC4Q92889 CTHRC1P1-201ENST00000605383 469 ntBASIC4.38□□□□□ -1.71
ERCC4Q92889 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC4Q92889 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC4Q92889 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ERCC4Q92889 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC4Q92889 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
ERCC4Q92889 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC4Q92889 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC4Q92889 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
ERCC4Q92889 RNU1-18P-201ENST00000363062 164 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 RN7SKP227-201ENST00000364445 330 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 SNORA23-201ENST00000365128 182 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 Y_RNA.373-201ENST00000365600 103 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ERCC4Q92889 RPS26P8-201ENST00000393490 348 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 RNU2-43P-201ENST00000410306 190 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.37□□□□□ -1.71
ERCC4Q92889 SSXP9-201ENST00000417503 292 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.37□□□□□ -1.71
ERCC4Q92889 AC004866.2-201ENST00000438285 481 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.37□□□□□ -1.71
ERCC4Q92889 MTCO1P29-201ENST00000496868 288 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 KLHL2P1-201ENST00000508691 521 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.37□□□□□ -1.71
ERCC4Q92889 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.37□□□□□ -1.71
ERCC4Q92889 AC126177.3-201ENST00000551839 688 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 OR11H5P-201ENST00000554039 926 ntBASIC4.37□□□□□ -1.71
ERCC4Q92889 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.37□□□□□ -1.71
ERCC4Q92889 AC078795.3-201ENST00000602913 472 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms