Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AP000857.1-201ENST00000532151 543 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 KC877982.1-201ENST00000602313 470 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC073657.2-201ENST00000605661 303 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AL356321.1-201ENST00000621360 228 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 MIR3688-2-201ENST00000636963 87 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TM9SF4Q92544 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC004972.1-201ENST00000623934 2209 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AC007496.3-201ENST00000624987 3443 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF4Q92544 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF4Q92544 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF4Q92544 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF4Q92544 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 CIR1P3-201ENST00000405137 479 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 TOMM22P1-201ENST00000418578 312 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 RPL21P66-201ENST00000426566 466 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AC079780.1-201ENST00000428259 207 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 AL136380.1-201ENST00000447970 162 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 MTCO2P29-201ENST00000465212 189 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 MTAPP1-201ENST00000489154 819 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AC135721.1-201ENST00000497954 479 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 HMGB1P22-201ENST00000505315 124 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AC104027.1-201ENST00000521887 300 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 HMGB1P33-201ENST00000563485 527 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 MIR5004-201ENST00000579078 107 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 AL353743.1-202ENST00000431724 1695 ntBASIC3.13□□□□□ -1.91
TM9SF4Q92544 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF4Q92544 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF4Q92544 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF4Q92544 Y_RNA.390-201ENST00000383932 102 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 RNU6-837P-201ENST00000391056 108 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 U3.26-201ENST00000391236 204 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 AC245291.1-201ENST00000419501 328 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 ELOCP14-201ENST00000428070 331 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 RPL23AP22-201ENST00000437556 453 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 ELOCP7-201ENST00000439968 331 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 MTND2P24-201ENST00000453434 806 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 MTND1P9-201ENST00000453775 944 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 RPS27AP1-201ENST00000475545 471 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF4Q92544 AC010493.1-201ENST00000513479 292 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 SNORA64.4-201ENST00000516632 81 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 RNU6-64P-201ENST00000517119 105 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 RNU6-1073P-201ENST00000517182 106 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 OR5AQ1P-201ENST00000527596 927 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 DEFB108D-201ENST00000527787 222 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 AP001596.2-201ENST00000608410 312 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 AC004908.2-201ENST00000609090 574 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 TUG1_1.1-201ENST00000610654 145 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 AL162274.2-201ENST00000614406 332 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 AC139792.3-201ENST00000623525 224 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 AP001350.1-201ENST00000601906 1524 ntBASIC3.12□□□□□ -1.91
TM9SF4Q92544 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
TM9SF4Q92544 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms