Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 AK6P2-201ENST00000549020 471 ntBASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 MIR15A-201ENST00000607334 83 ntBASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 AC011476.5-201ENST00000615594 130 ntBASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 AC073136.1-201ENST00000449426 2884 ntBASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-3Q8TAU0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AC005332.5-201ENST00000591222 2919 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 Y_RNA.563-201ENST00000384707 108 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AL357139.1-201ENST00000407792 426 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AL353621.1-201ENST00000418219 243 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 RPS15AP40-201ENST00000419621 391 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 CYCSP43-201ENST00000438233 310 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AC010683.1-201ENST00000473673 378 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AC098976.1-201ENST00000513014 541 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 RNU6-612P-201ENST00000516909 102 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AC092470.1-201ENST00000546187 132 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AC090617.3-201ENST00000573670 475 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 MIR3667-201ENST00000581025 74 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 RPL23AP78-201ENST00000599928 470 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AP000787.2-201ENST00000604432 568 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 AC004852.3-201ENST00000614131 326 ntBASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-3Q8TAU0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 RNU6-1301P-201ENST00000362724 104 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 RNA5SP391-201ENST00000363456 119 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 MIR578-201ENST00000384828 96 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 SNORA46.1-201ENST00000391069 153 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 RNU11-4P-201ENST00000391149 133 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 AF186996.5-201ENST00000418098 904 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 AC011742.1-201ENST00000431448 434 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 RPS29P9-201ENST00000440360 171 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 UQCRBP2-201ENST00000447827 297 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 U8.22-201ENST00000459141 133 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 RN7SL443P-201ENST00000464331 290 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 RN7SL244P-201ENST00000493405 297 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 RNU7-175P-201ENST00000515915 61 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 AL022401.1-201ENST00000619498 108 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 AC099506.2-201ENST00000623074 221 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 MAPK10-328ENST00000641553 4009 ntBASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-3Q8TAU0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 MIR410-201ENST00000362222 80 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 Y_RNA.136-201ENST00000363444 102 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 Y_RNA.331-201ENST00000365267 102 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 SNORA70.10-201ENST00000384515 134 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 RNU6-603P-201ENST00000411403 107 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AC112498.1-201ENST00000444401 332 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms