Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 RPL12P25-201ENST00000455592 494 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 RPS20P22-201ENST00000473700 357 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 SNORA31.6-201ENST00000516241 130 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 SNORA31.25-201ENST00000517242 134 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AP003355.1-201ENST00000518956 587 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC087897.1-201ENST00000550134 156 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AL445435.1-201ENST00000604232 665 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC136601.2-201ENST00000604356 474 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC069545.1-201ENST00000605671 358 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AL158211.4-201ENST00000606988 584 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC007349.4-201ENST00000608114 532 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC243773.3-201ENST00000613270 256 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC023158.2-201ENST00000614876 543 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AL603758.1-201ENST00000618654 241 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 MTND1P37-201ENST00000636562 264 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 MTND5P30-201ENST00000452896 1731 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 CENPCP1-201ENST00000533085 2578 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 RNU6-28P-201ENST00000362378 107 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 BTF3P7-201ENST00000407097 488 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 RNU2-40P-201ENST00000410833 196 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 RNA5SP508-201ENST00000411327 119 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 SRIP2-201ENST00000428470 166 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 USP9YP22-201ENST00000438971 294 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 MTCO3P27-201ENST00000514397 196 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 RNU6-840P-201ENST00000517275 65 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 DEFB130C-202ENST00000530001 230 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 SLC2A13P1-201ENST00000531560 322 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AL359212.1-201ENST00000556608 614 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AC009097.3-201ENST00000563557 1018 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 MIR4287-201ENST00000579398 78 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 MIR5708-201ENST00000579723 85 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AL121917.1-203ENST00000605534 577 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AL445264.1-201ENST00000621719 171 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AC091932.3-201ENST00000624223 323 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
CLHC1Q8NHS4 AP005901.5-201ENST00000545779 1796 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 Y_RNA.234-201ENST00000364409 97 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 RNU1-91P-201ENST00000364746 163 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 RPL23AP29-201ENST00000397284 453 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC005005.2-201ENST00000420779 380 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AL139421.1-201ENST00000423010 169 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AL591719.1-201ENST00000444669 744 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 ARPC3P5-201ENST00000448802 534 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 RPL23AP7-203ENST00000449021 469 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC109486.1-201ENST00000486833 374 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 HMGB1P28-201ENST00000507778 552 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC006499.2-201ENST00000513470 337 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 NRON-201ENST00000517270 370 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC022662.1-201ENST00000580252 331 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 MIR5002-201ENST00000584713 97 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AC098657.3-201ENST00000620434 263 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 AP003400.5-201ENST00000624827 617 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLHC1Q8NHS4 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 VN1R51P-201ENST00000411675 945 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 BPY2DP-201ENST00000422208 265 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 RPS3AP44-201ENST00000425466 790 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 C1DP1-201ENST00000426049 402 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms