Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 MTCO1P29-201ENST00000496868 288 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 AC092436.1-201ENST00000506450 503 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 AC091885.1-201ENST00000506658 268 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 HMGB3P15-201ENST00000507326 574 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-798P-201ENST00000516912 103 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 OR5B10P-201ENST00000532869 642 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 CYCSP29-201ENST00000533731 318 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 DNAJC8P1-201ENST00000554535 372 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 TVP23BP1-201ENST00000557500 617 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 MED28P6-201ENST00000558776 231 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 APOOP1-201ENST00000604695 592 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 ARF4P1-201ENST00000605447 541 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 AC245517.5-201ENST00000611529 162 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIMC1Q8NDZ2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-552P-201ENST00000362869 119 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 Y_RNA.133-201ENST00000363428 110 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 Y_RNA.339-201ENST00000365325 102 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 RNA5SP366-201ENST00000365454 123 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 Y_RNA.395-201ENST00000383945 109 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 MIR19A-201ENST00000384878 82 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 RNY4P36-201ENST00000391116 96 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 RPL23AP26-201ENST00000412728 464 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 RPL7L1P10-201ENST00000427790 463 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AC090774.1-201ENST00000435925 246 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 HMGN2P7-201ENST00000456186 273 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 HMGN2P16-201ENST00000456802 261 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 RPS29P15-201ENST00000458329 171 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AC017037.1-201ENST00000508460 471 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AL163153.1-201ENST00000554223 283 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 MIR4775-201ENST00000581168 75 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 DPPA3P3-201ENST00000603842 430 ntBASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIMC1Q8NDZ2 AF117829.1-206ENST00000621883 3802 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AL139276.1-201ENST00000311910 1001 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 HSPE1P11-201ENST00000339579 310 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU5A-1-201ENST00000362698 116 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU5A-8P-201ENST00000364102 114 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 SNORA62.1-201ENST00000364287 154 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 U3.12-201ENST00000364498 214 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 SNORA22B-201ENST00000383876 138 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-76P-201ENST00000384060 104 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-639P-201ENST00000384074 107 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AL606923.1-201ENST00000406616 190 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-1304P-201ENST00000411374 106 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AL356867.1-201ENST00000429623 299 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RPL21P89-201ENST00000444021 467 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RPS11P1-201ENST00000451072 473 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU7-152P-201ENST00000458982 64 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU7-182P-201ENST00000459009 62 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 Y_RNA.635-201ENST00000459041 101 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC126389.1-201ENST00000477436 290 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC068305.1-201ENST00000497406 726 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 FTH1P21-201ENST00000512179 511 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-864P-201ENST00000516256 108 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 Y_RNA.682-201ENST00000516457 100 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-840P-201ENST00000517275 65 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 IGKV2-23-201ENST00000518729 323 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 RPL23AP87-202ENST00000573039 466 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 MIR4424-201ENST00000585257 86 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms