Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AL353678.1-201ENST00000422735 741 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 USP12PX-201ENST00000432383 1057 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 RPL23AP83-201ENST00000434984 473 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 HMGB1P12-201ENST00000438594 598 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 HMGN2P16-201ENST00000456802 261 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC010631.1-201ENST00000474150 156 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC007182.2-201ENST00000489251 402 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 SNORA31.8-201ENST00000516327 108 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 MTND1P5-201ENST00000517906 940 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 FAM92A1P1-201ENST00000528023 890 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 ARL2BPP2-201ENST00000550907 489 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 SUB1P2-201ENST00000556401 297 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC037471.2-201ENST00000564941 598 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 GLUD1P4-201ENST00000590914 418 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC124864.2-201ENST00000624736 186 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 MIR6863-201ENST00000636112 90 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AL021368.2-201ENST00000606125 5352 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AL672296.1-201ENST00000427780 2158 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 DEFB108F-201ENST00000344638 222 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 Y_RNA.1-201ENST00000352915 104 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RNA5SP295-201ENST00000362655 121 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RNU5A-1-201ENST00000362698 116 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-108P-201ENST00000365558 107 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-39P-201ENST00000384344 107 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 MIR491-201ENST00000384877 84 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RNU2-36P-201ENST00000410361 191 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RNU2-71P-201ENST00000411395 189 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 FCF1P9-201ENST00000412546 282 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 GPR143P-201ENST00000434155 205 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 HMGB3P11-201ENST00000440127 604 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 Z99127.3-201ENST00000448158 395 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 PSPHP1-201ENST00000450062 261 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 SNRPGP6-201ENST00000451124 220 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 HSPE1P6-201ENST00000479457 291 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RPS3AP14-201ENST00000483907 780 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC023194.1-201ENST00000493084 308 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC026427.2-201ENST00000506228 536 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 SCARNA24.1-201ENST00000516465 137 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 RNU7-51P-201ENST00000516560 62 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC093012.1-202ENST00000549403 582 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC124947.2-202ENST00000552735 133 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC007684.1-201ENST00000609671 477 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH20Q8N6Y1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH20Q8N6Y1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
PCDH20Q8N6Y1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PCDH20Q8N6Y1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH20Q8N6Y1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
PCDH20Q8N6Y1 AC118273.1-201ENST00000525324 3006 ntBASIC3.27□□□□□ -1.89
PCDH20Q8N6Y1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH20Q8N6Y1 RPL7P26-201ENST00000333817 754 ntBASIC3.27□□□□□ -1.89
PCDH20Q8N6Y1 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms