Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC055855.1-201ENST00000489563 579 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 SNORA19.2-201ENST00000516013 114 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 Y_RNA.691-201ENST00000516611 103 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 SNORD60.2-201ENST00000516883 86 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 IGLVIV-53-201ENST00000520107 367 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC005476.1-201ENST00000554427 397 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 MIR5004-201ENST00000579078 107 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 MIR3171-201ENST00000584270 74 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC105429.2-201ENST00000610567 517 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC040896.1-201ENST00000613819 479 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AL162274.2-201ENST00000614406 332 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 MTND5P42-201ENST00000637720 498 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SYNE4Q8N205 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNE4Q8N205 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SYNE4Q8N205 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SYNE4Q8N205 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC058791.1-201ENST00000608412 3198 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE4Q8N205 MIR369-201ENST00000362155 70 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 RNU6-831P-201ENST00000384548 107 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 U3.29-201ENST00000391296 212 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 HMGN2P8-201ENST00000391458 268 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AL031121.1-201ENST00000406553 254 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 RNA5SP39-201ENST00000411245 120 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AL160275.2-201ENST00000412010 394 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 HMGN1P24-201ENST00000412282 298 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE4Q8N205 SNORD19B-201ENST00000459623 84 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 RPL21P8-201ENST00000465083 535 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 RN7SL594P-201ENST00000470590 287 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 OR4P1P-201ENST00000530808 1136 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 ELOCP31-201ENST00000540463 467 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC026333.2-201ENST00000542164 106 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 OR4T1P-201ENST00000554933 911 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 MIR3146-201ENST00000580367 79 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC098848.2-201ENST00000588023 330 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AL162713.1-201ENST00000604480 262 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC113139.1-201ENST00000605049 239 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AL627309.6-201ENST00000606857 840 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 AC103710.3-201ENST00000608157 948 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.27□□□□□ -1.73
SYNE4Q8N205 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE4Q8N205 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SYNE4Q8N205 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE4Q8N205 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE4Q8N205 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE4Q8N205 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE4Q8N205 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE4Q8N205 AC092447.10-201ENST00000620607 1652 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE4Q8N205 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE4Q8N205 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE4Q8N205 Y_RNA.22-201ENST00000362492 102 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 SNORA80A-201ENST00000363922 136 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 RNU6-283P-201ENST00000364788 107 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 RNA5SP126-201ENST00000365092 109 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 RNU6-996P-201ENST00000365438 107 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 Y_RNA.367-201ENST00000365544 101 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 MIR708-201ENST00000390708 88 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 MTND3P16-201ENST00000452205 344 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 IFNWP4-201ENST00000453148 294 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 AC006512.1-201ENST00000468816 291 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 AC106872.2-201ENST00000494303 480 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 RPL38P4-201ENST00000502376 214 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 TXNP6-201ENST00000510190 310 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 RNA5SP341-201ENST00000516261 117 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 RN7SKP234-201ENST00000517173 224 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 OR4R1P-201ENST00000529879 463 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms