Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LINC01561Q8N1V8 AC004520.1-201ENST00000608362 1413 ntBASIC2.25□□□□□ -2.05
LINC01561Q8N1V8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 OR5J1P-201ENST00000313544 939 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 U3.6-201ENST00000363622 211 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 RNU6-288P-201ENST00000363690 104 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 RNU6-395P-201ENST00000365662 106 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 MIR585-201ENST00000384887 94 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 RNA5SP344-201ENST00000411081 104 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AL589872.1-201ENST00000426602 288 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 MED13P1-201ENST00000428342 171 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 DPPA3P1-201ENST00000448050 469 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC115115.1-201ENST00000449927 248 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC233279.1-201ENST00000455300 423 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC093899.1-201ENST00000457984 376 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 ACTR3P3-201ENST00000480448 893 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 MTCO1P35-201ENST00000515270 228 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 RNU6-759P-201ENST00000516740 103 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC103843.2-201ENST00000530523 682 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 OR5BN1P-201ENST00000532955 829 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 MIR1273C-201ENST00000578669 77 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 MIR3117-201ENST00000584034 78 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 HMGN1P30-201ENST00000589286 268 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 BNIP3P8-201ENST00000597863 560 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC091152.3-201ENST00000604227 325 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AL359547.2-201ENST00000615810 418 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 U4.6-201ENST00000621618 127 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 AC004944.1-201ENST00000517807 3059 ntBASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01561Q8N1V8 MTND5P1-201ENST00000445440 1375 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 SNORA51.4-201ENST00000364993 124 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 RNU6-748P-201ENST00000384648 107 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 MIR558-201ENST00000384920 94 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AL356057.2-201ENST00000403318 432 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 RNA5SP44-201ENST00000410446 133 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 ELOCP4-201ENST00000420090 333 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AL158156.1-201ENST00000422509 473 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 HMGN2P31-201ENST00000432430 273 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 PGBD4P3-201ENST00000440731 581 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AL136380.1-201ENST00000447970 162 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 RBMY2UP-201ENST00000453474 324 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC006445.1-201ENST00000491925 405 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC139453.3-201ENST00000493276 369 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 GZMAP1-201ENST00000503054 631 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 RNU1-143P-201ENST00000516296 146 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC009902.1-201ENST00000519351 183 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC007991.1-201ENST00000522680 631 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AP003181.2-201ENST00000528941 181 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AL157871.3-201ENST00000557231 293 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 RPL21P12-201ENST00000559810 515 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 RN7SL703P-201ENST00000578485 302 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC090616.3-201ENST00000582184 217 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC009977.1-201ENST00000586015 570 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms