Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 AC007685.1-201ENST00000329806 452 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 RNU6-637P-201ENST00000384050 107 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 SNORA5.1-201ENST00000384275 131 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 Y_RNA.495-201ENST00000384435 112 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 RNU5A-5P-201ENST00000411054 116 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 REREP1Y-201ENST00000422655 198 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 AC091390.1-201ENST00000433904 331 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 PPIAP13-201ENST00000434706 478 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 REREP2Y-201ENST00000439103 200 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 AC079354.2-201ENST00000453523 154 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 RN7SL354P-201ENST00000469282 294 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 AC006511.1-201ENST00000470614 315 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 RNU7-175P-201ENST00000515915 61 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 RNU7-121P-201ENST00000516604 62 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 IGKV1-32-201ENST00000519290 311 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 AP003327.1-201ENST00000529684 127 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 AC104581.2-201ENST00000572227 430 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 RN7SL652P-201ENST00000577769 300 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 snoZ196.1-201ENST00000625269 89 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 AC069528.2-201ENST00000624849 1991 ntBASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS3Q8IXF0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 RN7SKP100-201ENST00000411258 284 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 CYCSP33-201ENST00000414485 327 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 RPS12P23-201ENST00000419579 400 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AC016712.1-201ENST00000431088 378 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 RPL12P18-201ENST00000437175 325 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 POLR2KP2-201ENST00000438155 177 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 RPL26P6-201ENST00000440913 438 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AL360271.2-201ENST00000447710 161 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 U8.21-201ENST00000459536 136 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AC104057.1-201ENST00000515547 497 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AC055872.1-201ENST00000570978 278 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AC015726.2-201ENST00000620112 122 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 snoU18.1-201ENST00000629629 71 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 AC099654.2-201ENST00000433031 1980 ntBASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NPAS3Q8IXF0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 AC126755.2-208ENST00000327792 462 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 AC138969.1-213ENST00000331436 462 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 U3.6-201ENST00000363622 211 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 RNU11-4P-201ENST00000391149 133 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 SNORA77-201ENST00000408716 125 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 RPL7AP25-201ENST00000423357 805 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 AC074290.1-201ENST00000448883 135 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 AC073901.1-201ENST00000462471 408 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 AC006499.6-201ENST00000511169 607 ntBASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.23□□□□□ -1.57
NPAS3Q8IXF0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms