Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.03□□□□□ -1.6
USP48Q86UV5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.02□□□□□ -1.61
USP48Q86UV5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
USP48Q86UV5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
USP48Q86UV5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP48Q86UV5 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 Y_RNA.431-201ENST00000384086 102 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 RNU6-1181P-201ENST00000384191 106 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 EIF4E2P1-201ENST00000393781 255 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 RNA5SP104-201ENST00000410989 118 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AC080125.1-201ENST00000414888 684 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.02□□□□□ -1.61
USP48Q86UV5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.02□□□□□ -1.61
USP48Q86UV5 HMGB3P11-201ENST00000440127 604 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.02□□□□□ -1.61
USP48Q86UV5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.02□□□□□ -1.61
USP48Q86UV5 AL645939.1-201ENST00000453429 797 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.02□□□□□ -1.61
USP48Q86UV5 TRBVA-201ENST00000498804 316 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.02□□□□□ -1.61
USP48Q86UV5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.02□□□□□ -1.61
USP48Q86UV5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.02□□□□□ -1.61
USP48Q86UV5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.02□□□□□ -1.61
USP48Q86UV5 AC005255.1-201ENST00000593748 216 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AP000942.4-201ENST00000604811 241 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AL160281.1-201ENST00000605307 311 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AC116312.1-201ENST00000606841 314 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.02□□□□□ -1.61
USP48Q86UV5 AC019176.2-201ENST00000611579 315 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 uc_338.15-201ENST00000615470 191 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AL133216.2-202ENST00000634512 349 ntBASIC5.02□□□□□ -1.61
USP48Q86UV5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USP48Q86UV5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP48Q86UV5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP48Q86UV5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP48Q86UV5 AL133412.1-201ENST00000380194 2992 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP48Q86UV5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.01□□□□□ -1.61
USP48Q86UV5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
USP48Q86UV5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP48Q86UV5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP48Q86UV5 RNU6-288P-201ENST00000363690 104 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 Y_RNA.301-201ENST00000364990 103 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 MIR491-201ENST00000384877 84 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
USP48Q86UV5 SNORA75.4-201ENST00000391278 119 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 RNA5SP39-201ENST00000411245 120 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AL591212.2-201ENST00000433923 257 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.01□□□□□ -1.61
USP48Q86UV5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.01□□□□□ -1.61
USP48Q86UV5 RPS24P6-201ENST00000452670 400 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.01□□□□□ -1.61
USP48Q86UV5 RPL21P93-201ENST00000480465 489 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AC025445.1-201ENST00000502728 300 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 HMGB1P22-201ENST00000505315 124 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AC110768.1-201ENST00000509222 400 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 HIGD1AP13-201ENST00000509878 289 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.01□□□□□ -1.61
USP48Q86UV5 AC090136.1-201ENST00000520009 240 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.01□□□□□ -1.61
USP48Q86UV5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.01□□□□□ -1.61
USP48Q86UV5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.01□□□□□ -1.61
USP48Q86UV5 U2.17-201ENST00000611454 95 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AC096577.2-201ENST00000611455 153 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AC103705.1-201ENST00000619013 241 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 AC008013.2-202ENST00000637965 364 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USP48Q86UV5 AC032011.1-201ENST00000611703 1549 ntBASIC5.01□□□□□ -1.61
USP48Q86UV5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
USP48Q86UV5 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5□□□□□ -1.61
USP48Q86UV5 AL161912.2-201ENST00000565707 3007 ntBASIC5□□□□□ -1.61
USP48Q86UV5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5□□□□□ -1.61
USP48Q86UV5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5□□□□□ -1.61
USP48Q86UV5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5□□□□□ -1.61
USP48Q86UV5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP48Q86UV5 AC087190.4-201ENST00000574616 8334 ntBASIC5□□□□□ -1.61
USP48Q86UV5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP48Q86UV5 DEFB108F-201ENST00000344638 222 ntBASIC5□□□□□ -1.61
USP48Q86UV5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP48Q86UV5 RNU6-738P-201ENST00000384531 106 ntBASIC5□□□□□ -1.61
USP48Q86UV5 RNA5SP219-201ENST00000390940 113 ntBASIC5□□□□□ -1.61
USP48Q86UV5 SNORD70.1-201ENST00000391007 85 ntBASIC5□□□□□ -1.61
USP48Q86UV5 RPL7P10-201ENST00000417407 739 ntBASIC5□□□□□ -1.61
USP48Q86UV5 AC091286.1-201ENST00000431233 461 ntBASIC5□□□□□ -1.61
USP48Q86UV5 AC236972.2-201ENST00000434979 310 ntBASIC5□□□□□ -1.61
USP48Q86UV5 RPL23AP46-201ENST00000438548 490 ntBASIC5□□□□□ -1.61
USP48Q86UV5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5□□□□□ -1.61
USP48Q86UV5 HMGN2P21-201ENST00000447764 270 ntBASIC5□□□□□ -1.61
USP48Q86UV5 PRDX3P3-201ENST00000447765 522 ntBASIC5□□□□□ -1.61
USP48Q86UV5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5□□□□□ -1.61
USP48Q86UV5 AC092451.1-201ENST00000480211 153 ntBASIC5□□□□□ -1.61
USP48Q86UV5 AP001086.1-201ENST00000494882 321 ntBASIC5□□□□□ -1.61
USP48Q86UV5 AC025554.1-201ENST00000505641 188 ntBASIC5□□□□□ -1.61
USP48Q86UV5 SNORA74D-201ENST00000516404 141 ntBASIC5□□□□□ -1.61
USP48Q86UV5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5□□□□□ -1.61
USP48Q86UV5 AP000889.2-201ENST00000532684 490 ntBASIC5□□□□□ -1.61
USP48Q86UV5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5□□□□□ -1.61
USP48Q86UV5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5□□□□□ -1.61
USP48Q86UV5 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5□□□□□ -1.61
USP48Q86UV5 AC022893.3-201ENST00000607665 437 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms