Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 ELOCP14-201ENST00000428070 331 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 MTND1P28-201ENST00000435623 950 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 ELOCP7-201ENST00000439968 331 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 RPL23AP58-201ENST00000440453 469 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AC114786.4-201ENST00000508771 728 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 RNA5SP471-201ENST00000516971 106 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 ARL2BPP2-201ENST00000550907 489 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AL451007.1-201ENST00000595491 289 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AC008739.2-201ENST00000597006 317 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AP003399.1-201ENST00000637534 361 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 MT-TH-201ENST00000387441 69 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 U3.26-201ENST00000391236 204 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AL021407.1-201ENST00000404531 386 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 MIR1289-1-201ENST00000408836 144 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 RNU2-36P-201ENST00000410361 191 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 Y_RNA.598-201ENST00000410480 95 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 RNU2-68P-201ENST00000410878 191 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 OR2AS1P-201ENST00000427827 319 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 SAR1AP4-201ENST00000429225 591 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC098826.2-201ENST00000452011 651 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 MTND1P12-201ENST00000455231 147 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 MTCO2P6-201ENST00000463134 685 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 MRPS17P3-201ENST00000465453 385 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 RPS3AP14-201ENST00000483907 780 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC109486.1-201ENST00000486833 374 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 RNA5SP165-201ENST00000517142 115 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AP006587.4-201ENST00000526053 529 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AP003181.2-201ENST00000528941 181 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC022878.1-201ENST00000530684 149 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 MIR548AB-201ENST00000584917 84 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC005498.1-201ENST00000592125 465 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 RPL23AP78-201ENST00000599928 470 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AL161798.1-201ENST00000604630 131 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AC007619.2-201ENST00000605743 379 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 MTND4P4-201ENST00000439033 1366 ntBASIC3.19□□□□□ -1.9
PRPF39Q86UA1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PRPF39Q86UA1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 RNU1-140P-201ENST00000365040 165 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 SNORD21-201ENST00000383953 95 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 RNU6-193P-201ENST00000410977 107 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 ZNF90P2-204ENST00000419323 1075 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 SDCBPP3-201ENST00000419629 891 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 SEPT2P1-201ENST00000419651 180 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC137499.1-201ENST00000427602 88 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 RPL36AP53-201ENST00000432891 316 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AL445567.1-201ENST00000439121 144 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 SNRPFP4-201ENST00000456366 242 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 RNU6-953P-201ENST00000459154 107 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC091179.1-201ENST00000461606 579 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC011825.1-201ENST00000484967 388 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 SUMO2P6-201ENST00000505273 288 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC010587.1-201ENST00000505809 469 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 RNU6-143P-201ENST00000516942 93 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 PSMA2P1-201ENST00000526365 646 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC022080.3-201ENST00000544433 482 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 MRPS36P5-201ENST00000551909 298 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms