Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RPL23AP41-201ENST00000484754 458 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 RN7SL20P-201ENST00000488827 297 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 RNU6-1183P-201ENST00000517054 60 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AC009902.1-201ENST00000519351 183 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AC004486.1-201ENST00000546846 233 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AL121821.2-201ENST00000556081 394 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 MIR5680-201ENST00000577577 84 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 BNIP3P40-201ENST00000596017 556 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AL109618.2-201ENST00000605527 211 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AL109620.1-201ENST00000618738 1197 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AC024581.2-201ENST00000619986 252 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AP002791.1-201ENST00000623291 381 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AL078595.3-201ENST00000623815 1166 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AC018692.3-201ENST00000623929 123 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 AP001002.2-201ENST00000625137 386 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 ADAM3A-203ENST00000461344 2157 ntBASIC1.93□□□□□ -2.1
MRPL55Q7Z7F7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 HSPA8P4-201ENST00000511877 1920 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 RNA5SP72-201ENST00000364442 117 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 RNA5SP125-201ENST00000364843 120 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 MIR7-3-201ENST00000384898 110 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 MIR513B-201ENST00000385136 84 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AF274854.1-201ENST00000413236 615 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 HMGB1P11-201ENST00000413899 637 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 CYCSP48-201ENST00000417124 323 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC128713.1-201ENST00000471495 306 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC025881.1-201ENST00000518851 512 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC107016.2-201ENST00000547968 190 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 CYCSP39-201ENST00000565821 309 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 MIR3167-201ENST00000579623 85 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 MIR3670-2-201ENST00000582974 65 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 MIR3158-1-201ENST00000583596 81 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 MIR3670-1-201ENST00000584160 65 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 MIR3670-3-201ENST00000584855 65 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC012119.1-201ENST00000603184 222 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC025588.2-201ENST00000604851 466 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 MIR3670-4-201ENST00000612260 65 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC005332.10-201ENST00000612725 619 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AC006133.1-201ENST00000617106 264 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 AL607023.1-201ENST00000620045 248 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 U6.105-201ENST00000637379 88 ntBASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
MRPL55Q7Z7F7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 CDC27P3-201ENST00000635418 1910 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AL109809.4-201ENST00000603520 2185 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 ZNF876P-202ENST00000398732 1485 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 MIR22-201ENST00000362190 85 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 Y_RNA.302-201ENST00000364997 102 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 MIR183-201ENST00000384958 110 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 MIR524-201ENST00000385242 87 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AC003685.2-201ENST00000422795 395 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AL592045.1-201ENST00000429867 352 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 CR769776.1-201ENST00000441254 787 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 BRK1P2-201ENST00000442875 223 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 NEFMP1-201ENST00000443423 1006 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 PRSS3P4-201ENST00000453323 162 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AP001324.2-201ENST00000461163 319 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 RPS29P2-201ENST00000479278 136 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 RPL39P36-201ENST00000490784 156 ntBASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.91□□□□□ -2.1
MRPL55Q7Z7F7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms