Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC004975.1-201ENST00000428733 208 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC087650.1-201ENST00000431445 468 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 RPL36AP6-201ENST00000435770 321 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 U3.44-201ENST00000458938 192 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 snoU13.3-201ENST00000459441 104 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 RNU6-1208P-201ENST00000459588 107 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 ST13P14-201ENST00000474095 734 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 RNU6-864P-201ENST00000516256 108 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 RNU6-1088P-201ENST00000516850 104 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 MIR2116-201ENST00000517221 80 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 RNA5SP179-201ENST00000517284 121 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 TRMT10BP1-201ENST00000519377 943 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC093249.1-201ENST00000567049 203 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 MIR3186-201ENST00000577404 85 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 MIR3690-201ENST00000580266 75 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AL670379.11-201ENST00000604059 253 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AL670379.10-201ENST00000604330 253 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AC091167.4-201ENST00000605079 184 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AL670379.12-201ENST00000605291 253 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 AL670379.9-201ENST00000605428 253 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 SNORA51-201ENST00000606420 132 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 uc_338.34-201ENST00000617467 174 ntBASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.87
COLCA1Q6ZS62 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 SNORD42.2-201ENST00000365570 69 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 SMIM11P1-201ENST00000369586 178 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 Y_RNA.387-201ENST00000383918 102 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 Y_RNA.414-201ENST00000384011 101 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 RPL21P65-201ENST00000406094 466 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 OR6C66P-201ENST00000414917 930 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 UBE2FP1-201ENST00000416536 447 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 USP9YP20-201ENST00000419224 558 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AL353729.1-201ENST00000425044 720 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AL691449.1-201ENST00000426570 421 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 VDAC1P3-201ENST00000434069 851 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 RPL35AP22-201ENST00000436855 335 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AL356535.1-201ENST00000440335 398 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 RPL21P93-201ENST00000480465 489 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC026726.1-201ENST00000512859 601 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC100870.1-201ENST00000522035 505 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC007224.1-201ENST00000564410 144 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 FRG2DP-202ENST00000566967 323 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AL355812.1-201ENST00000603215 216 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AL022099.1-201ENST00000604551 712 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AL390240.1-201ENST00000612950 384 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 TUG1_2.1-201ENST00000614234 87 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COLCA1Q6ZS62 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COLCA1Q6ZS62 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COLCA1Q6ZS62 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.38□□□□□ -1.87
COLCA1Q6ZS62 RNU6-1284P-201ENST00000363701 100 ntBASIC3.38□□□□□ -1.87
COLCA1Q6ZS62 RNU6-335P-201ENST00000364563 113 ntBASIC3.38□□□□□ -1.87
COLCA1Q6ZS62 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COLCA1Q6ZS62 RNU6-474P-201ENST00000384243 107 ntBASIC3.38□□□□□ -1.87
COLCA1Q6ZS62 RNU1-13P-201ENST00000384499 162 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms