Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 RPS3AP4-201ENST00000555161 764 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 OR4H12P-201ENST00000556269 907 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AP001330.4-201ENST00000604350 154 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 U1.23-201ENST00000610293 146 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 RNU1-68P-201ENST00000615382 146 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 U1.39-201ENST00000621562 146 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AC068880.5-201ENST00000624331 290 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 OR5AK4P-201ENST00000635912 903 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AL137003.2-201ENST00000606924 2538 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-282P-201ENST00000365357 103 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-1215P-201ENST00000384441 102 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AF274854.1-201ENST00000413236 615 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AL358934.1-201ENST00000432346 324 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 Z75741.1-201ENST00000446793 314 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 HMGN2P16-201ENST00000456802 261 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AC091179.1-201ENST00000461606 579 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 RPL9P6-201ENST00000492764 598 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 MTND4LP22-201ENST00000508209 276 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 RNU2-10P-201ENST00000516375 211 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 RNA5SP468-201ENST00000516782 93 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-1220P-201ENST00000517126 108 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AC128657.1-201ENST00000549459 145 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 ARL2BPP2-201ENST00000550907 489 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 DEFB131E-202ENST00000602581 683 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 AC004972.1-201ENST00000623934 2209 ntBASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SYNE3Q6ZMZ3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 Y_RNA.22-201ENST00000362492 102 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-181P-201ENST00000363225 107 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 SNORA38.1-201ENST00000364172 131 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 TXNP7-201ENST00000406296 293 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 ZNF90P2-204ENST00000419323 1075 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 OR2AS1P-201ENST00000427827 319 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 HMGB3P12-201ENST00000438745 556 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 RN7SL863P-201ENST00000462370 296 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 RPL21P8-201ENST00000465083 535 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AL049714.1-201ENST00000466686 347 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AC010631.1-201ENST00000474150 156 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-445P-201ENST00000516949 107 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AC016957.1-201ENST00000534895 309 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 GLUD1P4-201ENST00000590914 418 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 MIR98-201ENST00000606724 119 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 AP002360.4-201ENST00000606980 481 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 MIR7112-201ENST00000616126 65 ntBASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.7□□□□□ -1.82
SYNE3Q6ZMZ3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC002546.1-201ENST00000588041 2504 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 Y_RNA.6-201ENST00000362350 114 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 SNORD56.2-201ENST00000363242 71 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 SNORD15B-201ENST00000384714 146 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 MIR558-201ENST00000384920 94 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 RNU2-36P-201ENST00000410361 191 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 MTCO1P21-201ENST00000416634 589 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 RPL27AP8-201ENST00000424277 446 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms