Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 RNA5SP108-201ENST00000605921 117 ntBASIC3.72□□□□□ -1.81
VSTM1Q6UX27 TUG1_2.1-201ENST00000614234 87 ntBASIC3.72□□□□□ -1.81
VSTM1Q6UX27 U4.6-201ENST00000621618 127 ntBASIC3.72□□□□□ -1.81
VSTM1Q6UX27 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.72□□□□□ -1.81
VSTM1Q6UX27 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VSTM1Q6UX27 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VSTM1Q6UX27 AL645937.1-201ENST00000641739 1652 ntBASIC3.71□□□□□ -1.81
VSTM1Q6UX27 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VSTM1Q6UX27 ASNSP3-201ENST00000451989 1306 ntBASIC3.71□□□□□ -1.81
VSTM1Q6UX27 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 MIR30E-201ENST00000362104 92 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 Y_RNA.61-201ENST00000362835 102 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 MIR454-201ENST00000390180 115 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 RNU6-332P-201ENST00000391193 108 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 RNU4-65P-201ENST00000410473 140 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 RNU2-39P-201ENST00000410604 198 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 RPL21P24-201ENST00000413752 448 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AL137014.1-201ENST00000420490 1226 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AC079780.1-201ENST00000428259 207 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AL158071.1-201ENST00000430315 461 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 RPL35AP22-201ENST00000436855 335 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 DDX3P2-201ENST00000446138 111 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 HMGB3P30-201ENST00000457863 606 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AL162395.1-201ENST00000457882 422 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AC007458.1-201ENST00000542812 373 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 TGIF1P1-201ENST00000558095 802 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 MIR4775-201ENST00000581168 75 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AL355365.1-201ENST00000616480 294 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 AC005858.4-201ENST00000623191 700 ntBASIC3.71□□□□□ -1.82
VSTM1Q6UX27 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
VSTM1Q6UX27 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 RNU4-20P-201ENST00000365601 151 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 RNU6-1148P-201ENST00000410992 104 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 BX323014.1-201ENST00000412876 237 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AL513185.2-201ENST00000425543 193 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AL162389.1-201ENST00000449233 177 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 PPIAP3-201ENST00000450588 505 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AL118520.1-201ENST00000450770 291 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 MTND1P11-201ENST00000456661 876 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 snoU13.22-201ENST00000459428 104 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC008481.1-201ENST00000463278 396 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC010401.1-201ENST00000463867 348 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 GMFBP1-201ENST00000467831 427 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC084357.1-201ENST00000473404 255 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC026801.2-201ENST00000515352 425 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 RN7SKP219-201ENST00000516825 296 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC103783.1-201ENST00000520506 373 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AP005435.4-201ENST00000529514 284 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 OR5BN1P-201ENST00000532955 829 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC023050.3-201ENST00000541142 333 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC024619.4-201ENST00000580924 316 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC018638.8-201ENST00000588755 281 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 IGHV3-29-201ENST00000604817 344 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC090617.10-201ENST00000624308 134 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC099654.5-201ENST00000636479 350 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AC092326.2-201ENST00000624772 1561 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 AP001486.2-201ENST00000561652 5113 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms